RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 TRAPPC6BQ86SZ2 158 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 NAA40Q86UY6 237 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 HOGA1Q86XE5 327 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 IQCF2Q8IXL9 164 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 GCNT2Q8N0V5 402 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 CLRN3Q8NCR9 226 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 SLC30A7Q8NEW0 376 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 OR56B1Q8NGI3 324 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 OR8S1Q8NH09 359 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 TERB2Q8NHR7 220 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 FBXW5Q969U6 566 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 INTS12Q96CB8 462 aaKnown RBP8.54□□□□□ -1.04
MKS1-212ENST00000583577 MRPS24Q96EL2 167 aaKnown RBP8.54□□□□□ -1.04
MKS1-212ENST00000583577 CPNE2Q96FN4 548 aaPredicted RBP8.54□□□□□ -1.04
MKS1-212ENST00000583577 ARL5BQ96KC2 179 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 SLC6A7Q99884 636 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 VRK1Q99986 396 aaPredicted RBP8.54□□□□□ -1.04
MKS1-212ENST00000583577 OCSTAMPQ9BR26 566 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 SRXN1Q9BYN0 137 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 OR11A1Q9GZK7 315 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 BARX1Q9HBU1 254 aaPredicted RBP8.54□□□□□ -1.04
MKS1-212ENST00000583577 PCDHB16Q9NRJ7 776 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 GLRX2Q9NS18 164 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 ZFP57Q9NU63 452 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 TMEM100Q9NV29 134 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 FAM206AQ9NX38 181 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 MBD2Q9UBB5 411 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 ZNF629Q9UEG4 869 aaPredicted RBP8.54□□□□□ -1.04
MKS1-212ENST00000583577 NDRG3Q9UGV2 375 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 GTF2A1LQ9UNN4 478 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 EMC9Q9Y3B6 208 aa8.54□□□□□ -1.04
MKS1-212ENST00000583577 VWFP04275 2813 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 EEF1E1-BLOC1S5C9J1V9 151 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 MS4A18H0YCH9 400 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 TSPAN4O14817 238 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 SYT7O43581 403 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 DNPH1O43598 174 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 EIF1BO60739 113 aaKnown RBP8.53□□□□□ -1.04
MKS1-212ENST00000583577 SPDEFO95238 335 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 SIX6O95475 246 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 IL18BPO95998 194 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 RLN2P04090 185 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 ZNF20P17024 532 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 FPR2P25090 351 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 OPRM1P35372 400 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 GNALP38405 381 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 SLC6A9P48067 706 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 TAS2R46P59540 309 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 SLC35A1P78382 337 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 BTN1A1Q13410 526 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 RNPS1Q15287 305 aaKnown RBP8.53□□□□□ -1.04
MKS1-212ENST00000583577 C2orf68Q2NKX9 166 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 MS4A18Q3C1V0 323 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 C10orf91Q5T1B1 145 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 PXDC1Q5TGL8 231 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 DOK3Q7L591 496 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 TMED4Q7Z7H5 227 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 SPAG16Q8N0X2 631 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 OR1J2Q8NGS2 313 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 OR2AJ1Q8NGZ0 328 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 PPP1R1CQ8WVI7 109 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 ARL11Q969Q4 196 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 SLAMF6Q96DU3 332 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 DNAJA3Q96EY1 480 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 NAA11Q9BSU3 229 aaPredicted RBP8.53□□□□□ -1.04
MKS1-212ENST00000583577 ZNF416Q9BWM5 594 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 SFXN3Q9BWM7 321 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 TINAGL1Q9GZM7 467 aaPredicted RBP8.53□□□□□ -1.04
MKS1-212ENST00000583577 CST11Q9H112 138 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 RNF122Q9H9V4 155 aa8.53□□□□□ -1.04
MKS1-212ENST00000583577 CHMP1AQ9HD42 196 aaPredicted RBP8.53□□□□□ -1.04
MKS1-212ENST00000583577 PURGQ9UJV8 347 aaKnown RBP8.53□□□□□ -1.04
MKS1-212ENST00000583577 OR2AT4A6NND4 320 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 SERPINE3A8MV23 424 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 IGHG1P01857 330 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 TTRP02766 147 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 NAT2P11245 290 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 ZNF93P35789 620 aaPredicted RBP8.52□□□□□ -1.05
MKS1-212ENST00000583577 ATP5J2P56134 94 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 LSM6P62312 80 aaKnown RBP8.52□□□□□ -1.05
MKS1-212ENST00000583577 PLA2G7Q13093 441 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 TAF13Q15543 124 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 GFOD2Q3B7J2 385 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 SCGB2B2Q4G0G5 96 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 PABPC1L2AQ5JQF8 200 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 ELP2Q6IA86 826 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 Q6ZSR3 168 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 PEG10Q86TG7 708 aaKnown RBP8.52□□□□□ -1.05
MKS1-212ENST00000583577 BAP18Q8IXM2 172 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 CNEP1R1Q8N9A8 125 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 PNLDC1Q8NA58 520 aaKnown RBP8.52□□□□□ -1.05
MKS1-212ENST00000583577 OR10Z1Q8NGY1 313 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 OR6X1Q8NH79 312 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 PIK3IP1Q96FE7 263 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 GMPPAQ96IJ6 420 aaPredicted RBP8.52□□□□□ -1.05
MKS1-212ENST00000583577 ZNF471Q9BX82 626 aaPredicted RBP8.52□□□□□ -1.05
MKS1-212ENST00000583577 MRPL13Q9BYD1 178 aaKnown RBP8.52□□□□□ -1.05
MKS1-212ENST00000583577 NKX6-2Q9C056 277 aaPredicted RBP8.52□□□□□ -1.05
MKS1-212ENST00000583577 CHST6Q9GZX3 395 aa8.52□□□□□ -1.05
MKS1-212ENST00000583577 PBOV1Q9GZY1 135 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms