RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 SRRQ9GZT4 340 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 ASB7Q9H672 318 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 OR2S2Q9NQN1 319 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 TAS2R1Q9NYW7 299 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 CHMP5Q9NZZ3 219 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 SLC22A14Q9Y267 594 aa1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 KIF26AQ9ULI4 1882 aaPredicted RBP1.97□□□□□ -2.09
SMCHD1-209ENST00000583441 NRCAMQ92823 1304 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 GOLGA8IPA6NC78 632 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 hCG_2039718K7EN88 272 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 UBDO15205 165 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 YKT6O15498 198 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 COX7A2P2O60397 106 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 DHRS3O75911 302 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 FSTL3O95633 263 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 CST4P01036 141 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 PFN1P07737 140 aaKnown RBP1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 SEC11BP0C7V7 166 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 PTHLHP12272 177 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 MLNP12872 115 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 RPA3P35244 121 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 CCL23P55773 120 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 KRTAP10-10P60014 251 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 IL15RAQ13261 267 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 FAM53BQ14153 422 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 SSX1Q16384 188 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 Q499Y3 187 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 HBMQ6B0K9 141 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 CLEC18BQ6UXF7 455 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 FA2HQ7L5A8 372 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 FAM19A1Q7Z5A9 133 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 OR4K17Q8NGC6 315 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 ZBED3Q96IU2 234 aaPredicted RBP1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 CFAP53Q96M91 514 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 PITX2Q99697 317 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 SIGLEC1Q9BZZ2 1709 aa1.96□□□□□ -2.1
SMCHD1-209ENST00000583441 K7EPK0 472 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 K7ERQ8 282 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 GYG2O15488 501 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 ENSAO43768 121 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 PRTN3P24158 256 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 IMPA1P29218 277 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 GTF2H1P32780 548 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 SPAM1P38567 509 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 GCLMP48507 274 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 ACOT2P49753 483 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 TMEM136Q6ZRR5 245 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 PRNTQ86SH4 94 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 LINC00596Q86U02 117 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 OR4D6Q8NGJ1 314 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 BLNKQ8WV28 456 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 ITLN2Q8WWU7 325 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 TNFRSF14Q92956 283 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 BIRC8Q96P09 236 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 PRRG3Q9BZD7 231 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 DHX35Q9H5Z1 703 aaKnown RBP1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 TRIM45Q9H8W5 580 aaPredicted RBP1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 PLEKHA1Q9HB21 404 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 TMBIM4Q9HC24 238 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 USH1CQ9Y6N9 552 aa1.95□□□□□ -2.1
SMCHD1-209ENST00000583441 RPRD2Q5VT52 1461 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 ANKRD12Q6UB98 2062 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 IGKV2-24A0A0C4DH68 120 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 A0A1B0GW15 77 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 RBFOX3A6NFN3 312 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 LEUTXA8MZ59 168 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 IGLL5B9A064 214 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 D6RAR5 112 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 FADS2O95864 444 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 INAFM2P0DMQ5 153 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 SCGB1C2P0DMR2 95 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 PSMB9P28065 219 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 HADHBP55084 474 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 GPR176Q14439 515 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 USP50Q70EL3 339 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 PAGE2Q7Z2X7 111 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 ZFP62Q8NB50 900 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 OR6K3Q8NGY3 331 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 SCGB1C1Q8TD33 95 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 IFT81Q8WYA0 676 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 ZMYND19Q96E35 227 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 CPB2Q96IY4 423 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 ZNF396Q96N95 335 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 LHX5Q9H2C1 402 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 CLEC2DQ9UHP7 191 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 TRAPPC1Q9Y5R8 145 aa1.94□□□□□ -2.1
SMCHD1-209ENST00000583441 PGPA6NDG6 321 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 K7ERS5 55 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 CRXO43186 299 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 IGHG2P01859 326 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 SLC2A1P11166 492 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 TGFBR1P36897 503 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 LGALS7P47929 136 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 BAXQ07812 192 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 ENDOGQ14249 297 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 TRAM1Q15629 374 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 TRIP13Q15645 432 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 GOLGA7BQ2TAP0 167 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 BSXQ3C1V8 233 aa1.93□□□□□ -2.1
SMCHD1-209ENST00000583441 TMEM215Q68D42 235 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms