RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 METTL21EPA6NDL7 271 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 IGHV4-39P01824 125 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 CHRM2P08172 466 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 TNFSF8P32971 234 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 RBM11P57052 281 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 IL13RA2Q14627 380 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 ZNF146Q15072 292 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 FAM189A2Q15884 450 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 PIGYQ3MUY2 71 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 TEX36Q5VZQ5 186 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 METAP1DQ6UB28 335 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 LINC00299Q6ZSB3 139 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 LRRC28Q86X40 367 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 LAX1Q8IWV1 398 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 RAB40AQ8WXH6 277 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 S100A16Q96FQ6 103 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 WDFY2Q96P53 400 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 NICN1Q9BSH3 213 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 ATG5Q9H1Y0 275 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 SEBOXQ9HB31 216 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 IL36RNQ9UBH0 155 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 ADAM30Q9UKF2 790 aa13.71□□□□□ -0.21
CDK5RAP3-228ENST00000583363 ABCA2Q9BZC7 2435 aa13.71□□□□□ -0.22
CDK5RAP3-228ENST00000583363 VPS13CQ709C8 3753 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PPIAL4EA0A075B759 164 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 OOEPA6NGQ2 149 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM25AB3EWG3 89 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM25CB3EWG5 89 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM25GB3EWG6 89 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PPIAL4DF5H284 164 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 LGALS8O00214 317 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 GEMIN2O14893 280 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 ZNF205O95201 554 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FSTL3O95633 263 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 KNG1P01042 644 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PPIAL4FP0DN26 164 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 MUC1P15941 1255 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 DUSP1P28562 367 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 CD80P33681 288 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 S100A5P33763 92 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PITPNBP48739 271 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PTH2RP49190 550 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 VEGFCP49767 419 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 TMEM33P57088 247 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PDCD1Q15116 288 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 TAF9Q16594 264 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 SMIM21Q3B7S5 101 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 SFRP4Q6FHJ7 346 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 Q6P435 159 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 C19orf18Q8NEA5 215 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 GAL3ST1Q99999 423 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 GSX2Q9BZM3 304 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 CHODLQ9H9P2 273 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 NLKQ9UBE8 527 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PPIAL4AQ9Y536 164 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 TANC2Q9HCD6 1990 aa13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FLNAP21333 2647 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-228ENST00000583363 IGHV3OR15-7A0A075B7D8 119 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM90A10PA6NDY2 464 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM90A18PA6NE21 464 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM90A16PA6NEW6 464 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM90A20PA6NIJ5 464 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM90A8PA6NJQ4 464 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM90A7PA6NKC0 464 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 RFPL4AA6NLU0 287 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FOXI3A8MTJ6 420 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM90A22PA8MWA6 464 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM90A12PA8MX19 464 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM90A5PA8MXJ8 464 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM90A23PA8MXZ1 464 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 RFPL4AL1F8VTS6 287 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 RAB27BO00194 218 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 TNFRSF13BO14836 293 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 SOCS1O15524 211 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM90A15PP0C7V4 464 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM90A13PP0C7W8 464 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM90A14PP0C7W9 464 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FAM90A24PP0C7X0 464 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 PSG2P11465 335 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 CPT2P23786 658 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 SNU13P55769 128 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 ATP5J2P56134 94 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 TMEM50BP56557 158 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 MICBQ29980 383 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 MPV17LQ2QL34 196 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 MOGAT2Q3SYC2 334 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 SPIN3Q5JUX0 258 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 FIP1L1Q6UN15 594 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 LINC00596Q86U02 117 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 DEFB108BQ8NET1 73 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 OR5T2Q8NGG2 359 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 OR56B1Q8NGI3 324 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 DIRAS2Q96HU8 199 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 BARX1Q9HBU1 254 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 TMEM165Q9HC07 324 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 MYOZ1Q9NP98 299 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 DIABLOQ9NR28 239 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 DNAJB11Q9UBS4 358 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 GLS2Q9UI32 602 aa13.69□□□□□ -0.22
CDK5RAP3-228ENST00000583363 WIPI2Q9Y4P8 454 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms