RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 FCGR3AP08637 254 aa19.44■□□□□ 0.7
CCDC47-204ENST00000582252 PPP3CBP16298 524 aa19.44■□□□□ 0.7
CCDC47-204ENST00000582252 FGF12P61328 243 aa19.44■□□□□ 0.7
CCDC47-204ENST00000582252 GNG3P63215 75 aa19.44■□□□□ 0.7
CCDC47-204ENST00000582252 TEX261Q6UWH6 196 aa19.44■□□□□ 0.7
CCDC47-204ENST00000582252 PLK3Q9H4B4 646 aa19.44■□□□□ 0.7
CCDC47-204ENST00000582252 U3KQ87 197 aa19.44■□□□□ 0.7
CCDC47-204ENST00000582252 DOCK7Q96N67 2140 aa19.44■□□□□ 0.7
CCDC47-204ENST00000582252 A0A0B4J2A0 478 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 SDCBPO00560 298 aaPredicted RBP19.43■□□□□ 0.7
CCDC47-204ENST00000582252 IFNA7P01567 189 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 CD8AP01732 235 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 MPV17LQ2QL34 196 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 LY6G6FQ5SQ64 297 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 TMEM211Q6ICI0 200 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 ZNF585AQ6P3V2 769 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 UNQ6126/PRO20091Q6UXV3 157 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 LINC00596Q86U02 117 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 SLAMF9Q96A28 289 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 C5orf66Q9H5L9 145 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 ZNF286AQ9HBT8 521 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 PLSCR4Q9NRQ2 329 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 SHPKQ9UHJ6 478 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 ITPR1Q14643 2758 aa19.43■□□□□ 0.7
CCDC47-204ENST00000582252 RFPL4AA6NLU0 287 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 RFPL4AL1F8VTS6 287 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 ZNHIT1O43257 154 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 WISP2O76076 250 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 OR7C1O76099 320 aaPredicted RBP19.42■□□□□ 0.7
CCDC47-204ENST00000582252 CBR1P16152 277 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 SELEP16581 610 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 BCL3P20749 454 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 SSTR2P30874 369 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 HTR2BP41595 481 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 IDH3GP51553 393 aaPredicted RBP19.42■□□□□ 0.7
CCDC47-204ENST00000582252 EIF2S3LQ2VIR3 472 aaKnown RBP19.42■□□□□ 0.7
CCDC47-204ENST00000582252 AADACL3Q5VUY0 350 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 ZNF324BQ6AW86 544 aaPredicted RBP19.42■□□□□ 0.7
CCDC47-204ENST00000582252 C17orf78Q8N4C9 275 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 COQ8AQ8NI60 647 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 CASTOR1Q8WTX7 329 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 DHRS9Q9BPW9 319 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 HDHD3Q9BSH5 251 aaPredicted RBP19.42■□□□□ 0.7
CCDC47-204ENST00000582252 ZNF442Q9H7R0 627 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 C12orf4Q9NQ89 552 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 PROCRQ9UNN8 238 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 MCRIP1C9JLW8 97 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 SMPD2O60906 423 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 SFT2D2O95562 160 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 SFTPCP11686 197 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 PGAM2P15259 253 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 NPBWR2P48146 333 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 PPP1CBP62140 327 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 OPCMLQ14982 345 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 VWA1Q6PCB0 445 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 BHLHE23Q8NDY6 225 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 PKIBQ9C010 78 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 FGF23Q9GZV9 251 aaPredicted RBP19.42■□□□□ 0.7
CCDC47-204ENST00000582252 OR51B6Q9H340 312 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 RHOFQ9HBH0 211 aa19.42■□□□□ 0.7
CCDC47-204ENST00000582252 FXYD6-FXYD2A0A087WZ82 144 aa19.41■□□□□ 0.7
CCDC47-204ENST00000582252 CRHP06850 196 aa19.41■□□□□ 0.7
CCDC47-204ENST00000582252 PTGER4P35408 488 aa19.41■□□□□ 0.7
CCDC47-204ENST00000582252 OR2T2Q6IF00 324 aa19.41■□□□□ 0.7
CCDC47-204ENST00000582252 CYYR1Q96J86 154 aa19.41■□□□□ 0.7
CCDC47-204ENST00000582252 MICU1Q9BPX6 476 aa19.41■□□□□ 0.7
CCDC47-204ENST00000582252 ZNF2Q9BSG1 426 aaPredicted RBP19.41■□□□□ 0.7
CCDC47-204ENST00000582252 RTL8AQ9BWD3 113 aa19.41■□□□□ 0.7
CCDC47-204ENST00000582252 FXYD6Q9H0Q3 95 aa19.41■□□□□ 0.7
CCDC47-204ENST00000582252 HEXA-AS1Q9H8Q6 139 aa19.41■□□□□ 0.7
CCDC47-204ENST00000582252 OBP2BQ9NPH6 170 aa19.41■□□□□ 0.7
CCDC47-204ENST00000582252 CRIM1Q9NZV1 1036 aa19.41■□□□□ 0.7
CCDC47-204ENST00000582252 MBD3L4A6NDZ8 208 aaPredicted RBP19.4■□□□□ 0.7
CCDC47-204ENST00000582252 MBD3L3A6NE82 208 aaPredicted RBP19.4■□□□□ 0.7
CCDC47-204ENST00000582252 MBD3L5A6NJ08 208 aaPredicted RBP19.4■□□□□ 0.7
CCDC47-204ENST00000582252 IL32P24001 234 aa19.4■□□□□ 0.7
CCDC47-204ENST00000582252 KLRB1Q12918 225 aa19.4■□□□□ 0.7
CCDC47-204ENST00000582252 CISD2Q8N5K1 135 aaKnown RBP19.4■□□□□ 0.7
CCDC47-204ENST00000582252 ZNF680Q8NEM1 530 aa19.4■□□□□ 0.7
CCDC47-204ENST00000582252 MBD3L2Q8NHZ7 208 aaPredicted RBP19.4■□□□□ 0.7
CCDC47-204ENST00000582252 WDR89Q96FK6 387 aaPredicted RBP19.4■□□□□ 0.7
CCDC47-204ENST00000582252 DPCDQ9BVM2 203 aaPredicted RBP19.4■□□□□ 0.7
CCDC47-204ENST00000582252 SPACA1Q9HBV2 294 aa19.4■□□□□ 0.7
CCDC47-204ENST00000582252 OR5H14A6NHG9 310 aa19.39■□□□□ 0.7
CCDC47-204ENST00000582252 OR5H8P0DN80 308 aa19.39■□□□□ 0.7
CCDC47-204ENST00000582252 RAC2P15153 192 aa19.39■□□□□ 0.7
CCDC47-204ENST00000582252 CXCL2P19875 107 aa19.39■□□□□ 0.7
CCDC47-204ENST00000582252 TUBG1P23258 451 aa19.39■□□□□ 0.7
CCDC47-204ENST00000582252 SORDQ00796 357 aa19.39■□□□□ 0.7
CCDC47-204ENST00000582252 IL24Q13007 206 aa19.39■□□□□ 0.7
CCDC47-204ENST00000582252 KCTD9Q7L273 389 aa19.39■□□□□ 0.7
CCDC47-204ENST00000582252 RTBDNQ9BSG5 229 aaPredicted RBP19.39■□□□□ 0.7
CCDC47-204ENST00000582252 TUBG2Q9NRH3 451 aa19.39■□□□□ 0.7
CCDC47-204ENST00000582252 ZNF629Q9UEG4 869 aaPredicted RBP19.39■□□□□ 0.7
CCDC47-204ENST00000582252 IGKV1D-8A0A087WSZ0 117 aa19.39■□□□□ 0.69
CCDC47-204ENST00000582252 ARPC5O15511 151 aa19.39■□□□□ 0.69
CCDC47-204ENST00000582252 WDR1O75083 606 aa19.39■□□□□ 0.69
CCDC47-204ENST00000582252 CELA3BP08861 270 aa19.39■□□□□ 0.69
CCDC47-204ENST00000582252 S100A11P31949 105 aa19.39■□□□□ 0.69
CCDC47-204ENST00000582252 CYCSP99999 105 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms