RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 TMEM200AQ86VY9 491 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 Q8IYB0 196 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 SPERTQ8NA61 448 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 BEST4Q8NFU0 473 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 OR6F1Q8NGZ6 308 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 SNAPC3Q92966 411 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 MARVELD3Q96A59 401 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 RADILQ96JH8 1075 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 ADAT1Q9BUB4 502 aaKnown RBP7.96□□□□□ -1.14
SS18-220ENST00000582092 PKIBQ9C010 78 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 CHST6Q9GZX3 395 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 POFUT1Q9H488 388 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 SPACA1Q9HBV2 294 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 RANGRFQ9HD47 186 aaPredicted RBP7.96□□□□□ -1.14
SS18-220ENST00000582092 NPDC1Q9NQX5 325 aaPredicted RBP7.96□□□□□ -1.14
SS18-220ENST00000582092 ELF5Q9UKW6 265 aaPredicted RBP7.96□□□□□ -1.14
SS18-220ENST00000582092 RELNP78509 3460 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 COL12A1Q99715 3063 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 C7orf66A4D0T2 115 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 LRP5LA4QPB2 252 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 TMEM210A6NLX4 147 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 C16orf97H3BN30 126 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 J3QT63 122 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 GEMIN2O14893 280 aaKnown RBP7.95□□□□□ -1.14
SS18-220ENST00000582092 PDCD6O75340 191 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 TOXO94900 526 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 GRPP07492 148 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 CECR9P0C854 216 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 PGAM2P15259 253 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 PRKACAP17612 351 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 ANXA7P20073 488 aaKnown RBP7.95□□□□□ -1.14
SS18-220ENST00000582092 BCL3P20749 454 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 ECI1P42126 302 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 RBM11P57052 281 aaKnown RBP7.95□□□□□ -1.14
SS18-220ENST00000582092 TAS2R31P59538 309 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 FGF12P61328 243 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 CD300CQ08708 224 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 IKZF1Q13422 519 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 RBM39Q14498 530 aaKnown RBP7.95□□□□□ -1.14
SS18-220ENST00000582092 FCN2Q15485 313 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 GRK1Q15835 563 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 C3orf36Q3SXR2 165 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 TMEM255AQ5JRV8 349 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 ZNF787Q6DD87 383 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 HIST2H2BCQ6DN03 193 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 C6orf201Q7Z4U5 140 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 PEG10Q86TG7 708 aaKnown RBP7.95□□□□□ -1.14
SS18-220ENST00000582092 LINC00596Q86U02 117 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 HOGA1Q86XE5 327 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 FAM58AQ8N1B3 248 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 ARRDC1Q8N5I2 433 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 ZDHHC22Q8N966 263 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 OR8G5Q8NG78 346 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 OR4D10Q8NGI6 311 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 OR13G1Q8NGZ3 307 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 KLF14Q8TD94 323 aaPredicted RBP7.95□□□□□ -1.14
SS18-220ENST00000582092 EMG1Q92979 244 aaKnown RBP7.95□□□□□ -1.14
SS18-220ENST00000582092 S100PBPQ96BU1 408 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 ST6GAL2Q96JF0 529 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 ZNF75AQ96N20 296 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 DOCK7Q96N67 2140 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 SLC6A7Q99884 636 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 FAAP24Q9BTP7 215 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 CXXC4Q9H2H0 198 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 PPA2Q9H2U2 334 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 GHITMQ9H3K2 345 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 RANBP3Q9H6Z4 567 aaPredicted RBP7.95□□□□□ -1.14
SS18-220ENST00000582092 RHOFQ9HBH0 211 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 ZNF286AQ9HBT8 521 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 NGBQ9NPG2 151 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 EHFQ9NZC4 300 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 MGAT4CQ9UBM8 478 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 PURGQ9UJV8 347 aaKnown RBP7.95□□□□□ -1.14
SS18-220ENST00000582092 SLC25A15Q9Y619 301 aa7.95□□□□□ -1.14
SS18-220ENST00000582092 A0A0B4J293 547 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 IGHV2OR16-5A0A0B4J2B6 119 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 IGHV1-18A0A0C4DH31 117 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 PLSCR5A0PG75 271 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 A6NLC8 198 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 IQCF6A8MYZ5 107 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 DEGS1O15121 323 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 SSX5O60225 188 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 GSTT2P0CG29 244 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 ZNF35P13682 527 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 NAT1P18440 290 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 DTYMKP23919 212 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 PMELP40967 661 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 GLP1RP43220 463 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 IL24Q13007 206 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 MPV17LQ2QL34 196 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 PIGYQ3MUY2 71 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 ELP2Q6IA86 826 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 ZNF474Q6S9Z5 364 aaPredicted RBP7.94□□□□□ -1.14
SS18-220ENST00000582092 NOXA1Q86UR1 476 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 CALHM1Q8IU99 346 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 TCTE3Q8IZS6 198 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 OR5AP2Q8NGF4 316 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 LILRB4Q8NHJ6 448 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 TERB2Q8NHR7 220 aa7.94□□□□□ -1.14
SS18-220ENST00000582092 ST8SIA4Q92187 359 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms