RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 IRGMA1A4Y4 181 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 RAMP3O60896 148 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 SLC6A6P31641 620 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 GSK3AP49840 483 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 TIMM50Q3ZCQ8 353 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 TMEM236Q5W0B7 351 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 ZNF782Q6ZMW2 699 aaPredicted RBP11.74□□□□□ -0.53
IFT20-211ENST00000580991 Q8NFD4 153 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 TEX47Q8TBZ9 253 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 FANK1Q8TC84 345 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 OR5P3Q8WZ94 311 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 SLAMF6Q96DU3 332 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 TEX12Q9BXU0 123 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 SP140LQ9H930 580 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 SLC25A19Q9HC21 320 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 ABCB9Q9NP78 766 aa11.74□□□□□ -0.53
IFT20-211ENST00000580991 GAR1Q9NY12 217 aaKnown RBP11.74□□□□□ -0.53
IFT20-211ENST00000580991 SNTNA6NMZ2 147 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 ODF3BA8MYP8 253 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 ZNF878C9JN71 531 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 AIREO43918 545 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 SOX14O95416 240 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 ANXA2P07355 339 aaKnown RBP11.73□□□□□ -0.53
IFT20-211ENST00000580991 CCL3L1P16619 93 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 C21orf33P30042 268 aaPredicted RBP11.73□□□□□ -0.53
IFT20-211ENST00000580991 SLC15A1P46059 708 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 OR12D2P58182 307 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 KLHL12Q53G59 568 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 SLC25A30Q5SVS4 291 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 RNLSQ5VYX0 342 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 ETV3LQ6ZN32 361 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 CALHM1Q8IU99 346 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 OR52H1Q8NGJ2 320 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 OR13D1Q8NGV5 346 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 NDNFQ8TB73 568 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 DYNC2LI1Q8TCX1 351 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 LGALS12Q96DT0 336 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 AKR1E2Q96JD6 320 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 LYSTQ99698 3801 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 IFT27Q9BW83 186 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 OR52D1Q9H346 318 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 AMBNQ9NP70 447 aa11.73□□□□□ -0.53
IFT20-211ENST00000580991 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.73□□□□□ -0.53
IFT20-211ENST00000580991 TVP23AA6NH52 213 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 M0R129 80 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 IDH3BO43837 385 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 ENTPD6O75354 484 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 PSKH1P11801 424 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 LYL1P12980 280 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 DCTDP32321 178 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 PYCR1P32322 319 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 CX3CR1P49238 355 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 THBS3P49746 956 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 VBP1P61758 197 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 GRB2P62993 217 aaKnown RBP11.72□□□□□ -0.53
IFT20-211ENST00000580991 TSPAN31Q12999 210 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 PRDX4Q13162 271 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 LDLRAD2Q5SZI1 272 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 ZNF626Q68DY1 528 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 C16orf82Q7Z2V1 217 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 PROKR2Q8NFJ6 384 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 OR11H6Q8NGC7 330 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 OR2T27Q8NH04 317 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 TMEM80Q96HE8 168 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 RNF170Q96K19 258 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 ASCL2Q99929 193 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 ZNF649Q9BS31 505 aa11.72□□□□□ -0.53
IFT20-211ENST00000580991 DNAH1Q9P2D7 4330 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 ZNF850A8MQ14 1090 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 FAM90A22PA8MWA6 464 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 APOC1P02654 83 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 LPLP06858 475 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 SPARCP09486 303 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 GADD45AP24522 165 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 OPRL1P41146 370 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 NCS1P62166 190 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 LSM3P62310 102 aaKnown RBP11.71□□□□□ -0.53
IFT20-211ENST00000580991 CDK5Q00535 292 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 GINS1Q14691 196 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 GFOD2Q3B7J2 385 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 C10orf99Q6UWK7 81 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 RASSF6Q6ZTQ3 369 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 TCEANCQ8N8B7 351 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 OR4M1Q8NGD0 313 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 OR2T4Q8NH00 348 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 IL4I1Q96RQ9 567 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 MND1Q9BWT6 205 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 TSSK6Q9BXA6 273 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 DCSTAMPQ9H295 470 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 TVP23BQ9NYZ1 205 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 DNAJC27Q9NZQ0 273 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 CCDC59Q9P031 241 aaKnown RBP11.71□□□□□ -0.53
IFT20-211ENST00000580991 ERGIC3Q9Y282 383 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 HILPDAQ9Y5L2 63 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 A3GALT2U3KPV4 340 aa11.71□□□□□ -0.53
IFT20-211ENST00000580991 C17orf98A8MV24 154 aa11.7□□□□□ -0.54
IFT20-211ENST00000580991 MTRF1O75570 445 aaKnown RBP11.7□□□□□ -0.54
IFT20-211ENST00000580991 CST4P01036 141 aa11.7□□□□□ -0.54
IFT20-211ENST00000580991 DBTP11182 482 aaKnown RBP11.7□□□□□ -0.54
IFT20-211ENST00000580991 HSD11B1P28845 292 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms