RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 RHBDL1O75783 438 aa13□□□□□ -0.33
SS18-216ENST00000580751 CHRM2P08172 466 aa13□□□□□ -0.33
SS18-216ENST00000580751 INHBBP09529 407 aa13□□□□□ -0.33
SS18-216ENST00000580751 MNDAP41218 407 aa13□□□□□ -0.33
SS18-216ENST00000580751 OR3A4PP47883 348 aa13□□□□□ -0.33
SS18-216ENST00000580751 CLDN12P56749 244 aa13□□□□□ -0.33
SS18-216ENST00000580751 ZNF846Q147U1 533 aa13□□□□□ -0.33
SS18-216ENST00000580751 P2RY14Q15391 338 aa13□□□□□ -0.33
SS18-216ENST00000580751 ELP2Q6IA86 826 aa13□□□□□ -0.33
SS18-216ENST00000580751 CALHM1Q8IU99 346 aa13□□□□□ -0.33
SS18-216ENST00000580751 CIARTQ8N365 385 aaPredicted RBP13□□□□□ -0.33
SS18-216ENST00000580751 CLDND2Q8NHS1 167 aa13□□□□□ -0.33
SS18-216ENST00000580751 RAB39BQ96DA2 213 aa13□□□□□ -0.33
SS18-216ENST00000580751 DIRAS2Q96HU8 199 aa13□□□□□ -0.33
SS18-216ENST00000580751 URM1Q9BTM9 101 aaKnown RBP13□□□□□ -0.33
SS18-216ENST00000580751 RHBDL2Q9NX52 303 aa13□□□□□ -0.33
SS18-216ENST00000580751 ZNF469Q96JG9 3925 aaPredicted RBP13□□□□□ -0.33
SS18-216ENST00000580751 MTORP42345 2549 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 CSPG4Q6UVK1 2322 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 TMEM272A0A1B0GTI8 110 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 C3orf80F5H4A9 247 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 NOS1APO75052 506 aaPredicted RBP12.99□□□□□ -0.33
SS18-216ENST00000580751 KDM4BO94953 1096 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 ZNF205O95201 554 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 VSIG8P0DPA2 414 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 MUC1P15941 1255 aaPredicted RBP12.99□□□□□ -0.33
SS18-216ENST00000580751 EGR1P18146 543 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 CPT2P23786 658 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 CD40LGP29965 261 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 CD80P33681 288 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 RBMXP38159 391 aaKnown RBP12.99□□□□□ -0.33
SS18-216ENST00000580751 ARL6IP1Q15041 203 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 MICBQ29980 383 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 NHLRC3Q5JS37 347 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 FAM201AQ5SY85 155 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 TEX36Q5VZQ5 186 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 LAX1Q8IWV1 398 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 POC1AQ8NBT0 407 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 OR5H6Q8NGV6 325 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 OR51F2Q8NH61 342 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 SPACA5Q96QH8 159 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 SOSTQ9BQB4 213 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 TMEM165Q9HC07 324 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 DIABLOQ9NR28 239 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 DNAJB11Q9UBS4 358 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 PCDHB10Q9UN67 800 aa12.99□□□□□ -0.33
SS18-216ENST00000580751 CR1P17927 2039 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM90A10PA6NDY2 464 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM90A18PA6NE21 464 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM90A16PA6NEW6 464 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FABP12A6NFH5 140 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM90A20PA6NIJ5 464 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM90A8PA6NJQ4 464 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM90A7PA6NKC0 464 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM90A22PA8MWA6 464 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM90A12PA8MX19 464 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM90A5PA8MXJ8 464 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM90A23PA8MXZ1 464 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM25AB3EWG3 89 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM25CB3EWG5 89 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM25GB3EWG6 89 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.98□□□□□ -0.33
SS18-216ENST00000580751 WNT9BO14905 357 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 NDUFA2O43678 99 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 SYNGR1O43759 233 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 PLATP00750 562 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 CSTBP04080 98 aaKnown RBP12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM90A15PP0C7V4 464 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM90A13PP0C7W8 464 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM90A14PP0C7W9 464 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 FAM90A24PP0C7X0 464 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 PGA5P0DJD9 388 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 GTF2F2P13984 249 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 ELK1P19419 428 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 GLRA1P23415 457 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 PITPNAQ00169 270 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 RSU1Q15404 277 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 TMEM249Q2WGJ8 235 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 SMIM21Q3B7S5 101 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 SFRP4Q6FHJ7 346 aaPredicted RBP12.98□□□□□ -0.33
SS18-216ENST00000580751 DCDC5Q6ZRR9 648 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 SLC25A26Q70HW3 274 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 MAPK1IP1LQ8NDC0 245 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 DEFB108BQ8NET1 73 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 PHF21AQ96BD5 680 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 SLC25A38Q96DW6 304 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 NRIP2Q9BQI9 281 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 TMEM246Q9BRR3 403 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 TM2D1Q9BX74 207 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 ZNF665Q9H7R5 613 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 RASL12Q9NYN1 266 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 ING4Q9UNL4 249 aa12.98□□□□□ -0.33
SS18-216ENST00000580751 MED13LQ71F56 2210 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 A0A0B4J203 849 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 CEACAM18A8MTB9 384 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 TRAPPC2LH3BP13 241 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 XRCC3O43542 346 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 IGHV2-5P01817 119 aa12.97□□□□□ -0.33
SS18-216ENST00000580751 RPS2P15880 293 aaKnown RBP12.97□□□□□ -0.33
SS18-216ENST00000580751 GZMKP49863 264 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms