RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 SELENOWP63302 87 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 RUNX1Q01196 453 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 MEF2CQ06413 473 aaPredicted RBP5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 GABPB1Q06547 395 aaPredicted RBP5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 ZNF616Q08AN1 781 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 IFFO1Q0D2I5 559 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 HNF4GQ14541 408 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 SNCBQ16143 134 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 HLA-DRB5Q30154 266 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 LRRC23Q53EV4 343 aaPredicted RBP5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 PRAMEF5Q5TYX0 476 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 ACSM6Q6P461 480 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 CATSPERDQ86XM0 798 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 SGPP2Q8IWX5 399 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 FTMTQ8N4E7 242 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 ASCC1Q8N9N2 400 aaKnown RBP5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 OR56B4Q8NH76 319 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 ZNF596Q8TC21 504 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 AMELYQ99218 206 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 TMEM109Q9BVC6 243 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 OR10A2Q9H208 303 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 SLC22A13Q9Y226 551 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 LINC00312Q9Y6C7 94 aa5.9□□□□□ -1.46
SMARCE1-217ENST00000580654 DNAH17Q9UFH2 4485 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 A0A1B0GVY2 172 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 A0A1W2PPI3 338 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 hADV38S2A0JD32 116 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 C12orf77C9JDV5 145 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 ZNF593O00488 134 aaPredicted RBP5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 NXPH2O95156 264 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 ATP6V1B1P15313 513 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 ARSBP15848 533 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 TMEM11P17152 192 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 CD34P28906 385 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 IDH3AP50213 366 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 ARHGDIBP52566 201 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 SLURP1P55000 103 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 ERVK11-1P61568 191 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 DIAPH2-AS1Q14236 149 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 EDDM3AQ14507 147 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 TNFAIP8L3Q5GJ75 292 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 FGD3Q5JSP0 725 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 LINC00322Q6ZN03 302 aaPredicted RBP5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 GDPD3Q7L5L3 318 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 RTN4RL2Q86UN3 420 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 OR52N4Q8NGI2 321 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 OR5A2Q8NGI9 324 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 ARPC1AQ92747 370 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 ITFG2Q969R8 447 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 PGAM5Q96HS1 289 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 OR5B12Q96R08 314 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 TMEM120AQ9BXJ8 343 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 KLK15Q9H2R5 256 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 OR52D1Q9H346 318 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 RGCCQ9H4X1 137 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 HSPG2P98160 4391 aa5.89□□□□□ -1.47
SMARCE1-217ENST00000580654 OR5B21A6NL26 309 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 OOSP1A8MZH6 123 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 F8VVB4 439 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 F8VWA3 439 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 J3QT63 122 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 FXYD1O00168 92 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 PSMD9O00233 223 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 HSPA12AO43301 675 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 IFNA14P01570 189 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 HSD11B1P28845 292 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 CEACAM3P40198 252 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 MNDAP41218 407 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 TEX30Q5JUR7 227 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 SLC35F1Q5T1Q4 408 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 MOB3CQ70IA8 216 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 RRM2BQ7LG56 351 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 ZNF491Q8N8L2 437 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 Q8N9W7 124 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 PROKR2Q8NFJ6 384 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 FANK1Q8TC84 345 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 RNF133Q8WVZ7 376 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 UBE2E2Q96LR5 201 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 HIST1H2AAQ96QV6 131 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 FUZQ9BT04 418 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 THAP7Q9BT49 309 aaPredicted RBP5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 CCDC28BQ9BUN5 200 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 ALX4Q9H161 411 aaPredicted RBP5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 ABCG5Q9H222 651 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 ANKRD19PQ9H560 264 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 VIPAS39Q9H9C1 493 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 CD300AQ9UGN4 299 aa5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 RRP15Q9Y3B9 282 aaKnown RBP5.88□□□□□ -1.47
SMARCE1-217ENST00000580654 TRBV4-1A0A0J9YWV2 114 aa5.87□□□□□ -1.47
SMARCE1-217ENST00000580654 ANGPT2O15123 496 aa5.87□□□□□ -1.47
SMARCE1-217ENST00000580654 RGS16O15492 202 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-217ENST00000580654 PSPNO60542 156 aa5.87□□□□□ -1.47
SMARCE1-217ENST00000580654 IGKV1D-33P01593 117 aa5.87□□□□□ -1.47
SMARCE1-217ENST00000580654 IGKV1-33P01594 117 aa5.87□□□□□ -1.47
SMARCE1-217ENST00000580654 IGLV1-51P01701 117 aa5.87□□□□□ -1.47
SMARCE1-217ENST00000580654 GYPBP06028 91 aa5.87□□□□□ -1.47
SMARCE1-217ENST00000580654 CDK2P24941 298 aa5.87□□□□□ -1.47
SMARCE1-217ENST00000580654 SLC6A6P31641 620 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms