RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 ZSCAN4Q8NAM6 433 aaPredicted RBP18.28■□□□□ 0.52
SMARCD2-206ENST00000577990 MS4A7Q9GZW8 240 aaPredicted RBP18.28■□□□□ 0.52
SMARCD2-206ENST00000577990 FAM234AQ9H0X4 552 aa18.28■□□□□ 0.52
SMARCD2-206ENST00000577990 IL36RNQ9UBH0 155 aa18.28■□□□□ 0.52
SMARCD2-206ENST00000577990 TENM1Q9UKZ4 2725 aa18.28■□□□□ 0.52
SMARCD2-206ENST00000577990 A0A1W2PQ09 198 aa18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 HAND1O96004 215 aa18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 TK1P04183 234 aa18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 TMEM225BP0DP42 221 aa18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 PDCD1Q15116 288 aa18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 SPHARQ15513 63 aa18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 RBM48Q5RL73 367 aaKnown RBP18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 C9orf139Q6ZV77 190 aa18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 SATL1Q86VE3 508 aa18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 ASCC1Q8N9N2 400 aaKnown RBP18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 OR52N4Q8NGI2 321 aa18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 OR5M11Q96RB7 305 aa18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 GPER1Q99527 375 aa18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 ZNF184Q99676 751 aaPredicted RBP18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 SEBOXQ9HB31 216 aaPredicted RBP18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 RHOFQ9HBH0 211 aa18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 HMG20AQ9NP66 347 aa18.27■□□□□ 0.52
SMARCD2-206ENST00000577990 TRBV5-7A0A0A0MS05 114 aa18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 ALDOBP05062 364 aa18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 CALCBP10092 127 aa18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 SNU13P55769 128 aaKnown RBP18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 ZNF146Q15072 292 aa18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 SPIN3Q5JUX0 258 aa18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 VMO1Q7Z5L0 202 aa18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 FAM185AQ8N0U4 392 aa18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 BCL6BQ8N143 479 aaPredicted RBP18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 ORAI1Q96D31 301 aa18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 OR14A2Q96R54 314 aa18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 TMEM138Q9NPI0 162 aa18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 C19orf12Q9NSK7 152 aa18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 CKLFQ9UBR5 152 aa18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 GLS2Q9UI32 602 aa18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 BLOC1S6Q9UL45 172 aa18.26■□□□□ 0.51
SMARCD2-206ENST00000577990 K7N7A8 449 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 GABRPO00591 440 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 ZNF737O75373 536 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 GPX5O75715 221 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 VENTXO95231 258 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 IGFBP3P17936 291 aaPredicted RBP18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 FSTP19883 344 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 BDKRB2P30411 391 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 BPIFB3P59826 476 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 HILS1P60008 231 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 MED22Q15528 200 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 TUSC1Q2TAM9 212 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 PRSS48Q7RTY5 328 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 TNFAIP8L1Q8WVP5 186 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 LHX4Q969G2 390 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 JMJD8Q96S16 334 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 CCDC90BQ9GZT6 254 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 Q9H521 79 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 NBEAL1Q6ZS30 2694 aa18.25■□□□□ 0.51
SMARCD2-206ENST00000577990 CENPVL3A0A0U1RRI6 287 aa18.24■□□□□ 0.51
SMARCD2-206ENST00000577990 M0R1W7 72 aa18.24■□□□□ 0.51
SMARCD2-206ENST00000577990 DUSP1P28562 367 aa18.24■□□□□ 0.51
SMARCD2-206ENST00000577990 RPL31P62899 125 aaKnown RBP18.24■□□□□ 0.51
SMARCD2-206ENST00000577990 DDI2Q5TDH0 399 aa18.24■□□□□ 0.51
SMARCD2-206ENST00000577990 BRD3OSQ6XYD6 125 aa18.24■□□□□ 0.51
SMARCD2-206ENST00000577990 SIGLECL1Q8N7X8 197 aa18.24■□□□□ 0.51
SMARCD2-206ENST00000577990 PXT1Q8NFP0 134 aa18.24■□□□□ 0.51
SMARCD2-206ENST00000577990 THRSPQ92748 146 aa18.24■□□□□ 0.51
SMARCD2-206ENST00000577990 SNX22Q96L94 193 aa18.24■□□□□ 0.51
SMARCD2-206ENST00000577990 DERL3Q96Q80 235 aa18.24■□□□□ 0.51
SMARCD2-206ENST00000577990 FAM192AQ9GZU8 254 aa18.24■□□□□ 0.51
SMARCD2-206ENST00000577990 GSTK1Q9Y2Q3 226 aa18.24■□□□□ 0.51
SMARCD2-206ENST00000577990 A0A1W2PPK0 400 aa18.23■□□□□ 0.51
SMARCD2-206ENST00000577990 TMEM82A0PJX8 343 aa18.23■□□□□ 0.51
SMARCD2-206ENST00000577990 RBMS3Q6XE24 437 aaKnown RBP18.23■□□□□ 0.51
SMARCD2-206ENST00000577990 Q8N7P7 452 aa18.23■□□□□ 0.51
SMARCD2-206ENST00000577990 OR4M1Q8NGD0 313 aa18.23■□□□□ 0.51
SMARCD2-206ENST00000577990 EXOSC4Q9NPD3 245 aaKnown RBP18.23■□□□□ 0.51
SMARCD2-206ENST00000577990 SIRT7Q9NRC8 400 aa18.23■□□□□ 0.51
SMARCD2-206ENST00000577990 TRAV8-7A0A075B6U6 113 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 IGHV1-69DA0A0B4J2H0 117 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 IGHV1-69P01742 117 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 MAPK3P27361 379 aaPredicted RBP18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 ZNF93P35789 620 aaPredicted RBP18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 TGFBR2P37173 567 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 MTNR1BP49286 362 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 BMXP51813 675 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 BLMHQ13867 455 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 RUSC1-AS1Q66K80 236 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 C17orf107Q6ZR85 190 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 C1orf122Q6ZSJ8 110 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 OR8H2Q8N162 312 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 MS4A15Q8N5U1 240 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 OR5D13Q8NGL4 314 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 TBC1D15Q8TC07 691 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 UFD1Q92890 307 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 ZNF48Q96MX3 618 aaPredicted RBP18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 NKX3-1Q99801 234 aaPredicted RBP18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 FOXJ3Q9UPW0 622 aa18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 SOX21Q9Y651 276 aaPredicted RBP18.22■□□□□ 0.51
SMARCD2-206ENST00000577990 A0A1W2PPH5 198 aa18.21■□□□□ 0.51
SMARCD2-206ENST00000577990 MAGEA13PA6NCF6 341 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms