RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 NGBQ9NPG2 151 aa11.95□□□□□ -0.5
SREBF1-217ENST00000577897 B3GNT2Q9NY97 397 aa11.95□□□□□ -0.5
SREBF1-217ENST00000577897 AMDHD2Q9Y303 409 aa11.95□□□□□ -0.5
SREBF1-217ENST00000577897 RHBDD3Q9Y3P4 386 aa11.95□□□□□ -0.5
SREBF1-217ENST00000577897 PRR14LQ5THK1 2151 aa11.95□□□□□ -0.5
SREBF1-217ENST00000577897 TRRAPQ9Y4A5 3859 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 LOC100509620A0A075B734 347 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 FAM230AA0A1W2PPH8 454 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 ZNF736B4DX44 427 aaPredicted RBP11.94□□□□□ -0.5
SREBF1-217ENST00000577897 RAB27BO00194 218 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 TPD52L2O43399 206 aaKnown RBP11.94□□□□□ -0.5
SREBF1-217ENST00000577897 PEX14O75381 377 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 CBR1P16152 277 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 IGHV1-2P23083 117 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 RPS27AP62979 156 aaKnown RBP11.94□□□□□ -0.5
SREBF1-217ENST00000577897 GABRA6Q16445 453 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 ZNF260Q3ZCT1 412 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 HIKESHIQ53FT3 197 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 METTL11BQ5VVY1 283 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 STEAP1BQ6NZ63 245 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 MDP1Q86V88 176 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 ZDHHC23Q8IYP9 409 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 C3orf56Q8N813 242 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 NPRL2Q8WTW4 380 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 CCDC107Q8WV48 283 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 SEH1LQ96EE3 360 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 GAL3ST1Q99999 423 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 USB1Q9BQ65 265 aaKnown RBP11.94□□□□□ -0.5
SREBF1-217ENST00000577897 SLC25A21Q9BQT8 299 aaPredicted RBP11.94□□□□□ -0.5
SREBF1-217ENST00000577897 MED28Q9H204 178 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 MYEF2Q9P2K5 600 aaKnown RBP11.94□□□□□ -0.5
SREBF1-217ENST00000577897 MPC1Q9Y5U8 109 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 ALG5Q9Y673 324 aa11.94□□□□□ -0.5
SREBF1-217ENST00000577897 TRAV6A0A075B6T7 132 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 SERPINE3A8MV23 424 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 AKR7A2O43488 359 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 CA11O75493 328 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 RAD51DO75771 328 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 RAB3DO95716 219 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 IFNA6P05013 189 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 MGMTP16455 207 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 COX5AP20674 150 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 SERPINA2P20848 420 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 IL32P24001 234 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 ACKR3P25106 362 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 HGFACQ04756 655 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 UNC119Q13432 240 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 ARFRP1Q13795 201 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 OR10K2Q6IF99 312 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 SSX8Q7RTT4 187 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 TRAPPC6BQ86SZ2 158 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 MKXQ8IYA7 352 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 SAXO1Q8IYX7 474 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 PAQR4Q8N4S7 273 aaPredicted RBP11.93□□□□□ -0.5
SREBF1-217ENST00000577897 UPRTQ96BW1 309 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 MSI2Q96DH6 328 aaKnown RBP11.93□□□□□ -0.5
SREBF1-217ENST00000577897 MED30Q96HR3 178 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 SPACA5Q96QH8 159 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 PRRT1Q99946 306 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 PAPOLGQ9BWT3 736 aaKnown RBP11.93□□□□□ -0.5
SREBF1-217ENST00000577897 TM2D1Q9BX74 207 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 SELENOIQ9C0D9 397 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 LPAR5Q9H1C0 372 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 C20orf85Q9H1P6 137 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 KCNK15Q9H427 330 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 NOX3Q9HBY0 568 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.93□□□□□ -0.5
SREBF1-217ENST00000577897 PTTG3PQ9NZH4 202 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 IL36GQ9NZH8 169 aa11.93□□□□□ -0.5
SREBF1-217ENST00000577897 UBE2QL1A1L167 161 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 DPRXA6NFQ7 191 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 OR5B21A6NL26 309 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 HTR3BO95264 441 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 HIST1H1DP16402 221 aaKnown RBP11.92□□□□□ -0.5
SREBF1-217ENST00000577897 BTCP35070 178 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 RAD52P43351 418 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 FOXG1P55316 489 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-217ENST00000577897 RRAS2P62070 204 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-217ENST00000577897 PLA2G7Q13093 441 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 GK2Q14410 553 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-217ENST00000577897 CR1LQ2VPA4 569 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 CEACAM21Q3KPI0 293 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 RNASE10Q5GAN6 216 aaKnown RBP11.92□□□□□ -0.5
SREBF1-217ENST00000577897 SFRP4Q6FHJ7 346 aaPredicted RBP11.92□□□□□ -0.5
SREBF1-217ENST00000577897 TMEM17Q86X19 198 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 FAM89BQ8N5H3 189 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 FAM169BQ8N8A8 192 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 OR56B2PQ8NGI1 322 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 OR5A2Q8NGI9 324 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 C10orf105Q8TEF2 133 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 SCGB3A2Q96PL1 93 aa11.92□□□□□ -0.5
SREBF1-217ENST00000577897 MRPL15Q9P015 296 aaKnown RBP11.92□□□□□ -0.5
SREBF1-217ENST00000577897 C5orf63A6NC05 138 aa11.91□□□□□ -0.5
SREBF1-217ENST00000577897 TMEM235A6NFC5 223 aa11.91□□□□□ -0.5
SREBF1-217ENST00000577897 ZNF850A8MQ14 1090 aa11.91□□□□□ -0.5
SREBF1-217ENST00000577897 ICMTO60725 284 aa11.91□□□□□ -0.5
SREBF1-217ENST00000577897 LYZL6O75951 148 aa11.91□□□□□ -0.5
SREBF1-217ENST00000577897 NDUFB6O95139 128 aa11.91□□□□□ -0.5
SREBF1-217ENST00000577897 TGFAP01135 160 aa11.91□□□□□ -0.5
SREBF1-217ENST00000577897 IL5P05113 134 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms