RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 ZNF573Q86YE8 665 aa8.5□□□□□ -1.05
CRLF3-202ENST00000577725 C11orf53Q8IXP5 236 aa8.5□□□□□ -1.05
CRLF3-202ENST00000577725 FBXL14Q8N1E6 418 aa8.5□□□□□ -1.05
CRLF3-202ENST00000577725 ZCCHC24Q8N2G6 241 aaKnown RBP8.5□□□□□ -1.05
CRLF3-202ENST00000577725 PXT1Q8NFP0 134 aa8.5□□□□□ -1.05
CRLF3-202ENST00000577725 ITLN1Q8WWA0 313 aa8.5□□□□□ -1.05
CRLF3-202ENST00000577725 AQP3Q92482 292 aa8.5□□□□□ -1.05
CRLF3-202ENST00000577725 PHF21AQ96BD5 680 aa8.5□□□□□ -1.05
CRLF3-202ENST00000577725 MEGF10Q96KG7 1140 aa8.5□□□□□ -1.05
CRLF3-202ENST00000577725 CST11Q9H112 138 aa8.5□□□□□ -1.05
CRLF3-202ENST00000577725 DIABLOQ9NR28 239 aa8.5□□□□□ -1.05
CRLF3-202ENST00000577725 NKIRAS2Q9NYR9 191 aa8.5□□□□□ -1.05
CRLF3-202ENST00000577725 MTCH1Q9NZJ7 389 aa8.5□□□□□ -1.05
CRLF3-202ENST00000577725 FBLN5Q9UBX5 448 aa8.5□□□□□ -1.05
CRLF3-202ENST00000577725 NOP16Q9Y3C1 178 aaKnown RBP8.5□□□□□ -1.05
CRLF3-202ENST00000577725 PLSCR5A0PG75 271 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 MEIOCA2RUB1 952 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 TMEM235A6NFC5 223 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 TMEM210A6NLX4 147 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 TRAPPC2LH3BP13 241 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 RAB27BO00194 218 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 WNT9BO14905 357 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 AKR7A2O43488 359 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 GOSR1O95249 250 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 IGHV1-46P01743 117 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 TFF1P04155 84 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 IL7P13232 177 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 GNB3P16520 340 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 PRKACAP17612 351 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 DUSP1P28562 367 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 SERPINF1P36955 418 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 NR4A2P43354 598 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 TAF9Q16594 264 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 ZNF672Q499Z4 452 aaPredicted RBP8.49□□□□□ -1.05
CRLF3-202ENST00000577725 NKAPLQ5M9Q1 402 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 DCDC5Q6ZRR9 648 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 MOGAT3Q86VF5 341 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 LYSMD2Q8IV50 215 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 MKXQ8IYA7 352 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 OSR2Q8N2R0 312 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 Q8N402 240 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 GDPD1Q8N9F7 314 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 BOLLQ8N9W6 283 aaKnown RBP8.49□□□□□ -1.05
CRLF3-202ENST00000577725 ZSCAN4Q8NAM6 433 aaPredicted RBP8.49□□□□□ -1.05
CRLF3-202ENST00000577725 OR10R2Q8NGX6 335 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 OR52I2Q8NH67 350 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 PTX4Q96A99 478 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 Q96M66 194 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 CCDC32Q9BV29 185 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 PKIBQ9C010 78 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 SLC22A4Q9H015 551 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 C1orf123Q9NWV4 160 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 CISD1Q9NZ45 108 aaKnown RBP8.49□□□□□ -1.05
CRLF3-202ENST00000577725 TREM2Q9NZC2 230 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 IL36GQ9NZH8 169 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 GHRLQ9UBU3 117 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 ARFGEF3Q5TH69 2177 aa8.49□□□□□ -1.05
CRLF3-202ENST00000577725 A0A1B0GWJ7 208 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 A0A1W2PPR1 153 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 hCG_1807616A0A1W2PRN6 198 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 METTL21EPA6NDL7 271 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 GEMIN2O14893 280 aaKnown RBP8.48□□□□□ -1.05
CRLF3-202ENST00000577725 TPD52L2O43399 206 aaKnown RBP8.48□□□□□ -1.05
CRLF3-202ENST00000577725 CYB5AP00167 134 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 GTF2F2P13984 249 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 EGR1P18146 543 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 MPZP25189 248 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 PTBP1P26599 531 aaKnown RBP eCLIP8.48□□□□□ -1.05
CRLF3-202ENST00000577725 PMELP40967 661 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 CD200P41217 278 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 TMEM50BP56557 158 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 RBM11P57052 281 aaKnown RBP8.48□□□□□ -1.05
CRLF3-202ENST00000577725 TNFAIP6P98066 277 aaPredicted RBP8.48□□□□□ -1.05
CRLF3-202ENST00000577725 IL24Q13007 206 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 MST1LQ2TV78 715 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 ZNF260Q3ZCT1 412 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 CDNFQ49AH0 187 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 PLAC9Q5JTB6 97 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 TRIQKQ629K1 86 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 SAXO1Q8IYX7 474 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 SPERTQ8NA61 448 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 NUDCD2Q8WVJ2 157 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 DYRK2Q92630 601 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 EMG1Q92979 244 aaKnown RBP8.48□□□□□ -1.05
CRLF3-202ENST00000577725 YIPF5Q969M3 257 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 SEH1LQ96EE3 360 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 ARHGAP5-AS1Q96IT6 56 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 OR2V2Q96R30 315 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 TMEM204Q9BSN7 226 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 URM1Q9BTM9 101 aaKnown RBP8.48□□□□□ -1.05
CRLF3-202ENST00000577725 TM2D1Q9BX74 207 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 PECRQ9BY49 303 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 DYNLRB1Q9NP97 96 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 NOTCH1P46531 2555 aa8.48□□□□□ -1.05
CRLF3-202ENST00000577725 FOXI3A8MTJ6 420 aaPredicted RBP8.47□□□□□ -1.05
CRLF3-202ENST00000577725 VSTM5A8MXK1 200 aa8.47□□□□□ -1.05
CRLF3-202ENST00000577725 PGA5P0DJD9 388 aa8.47□□□□□ -1.05
CRLF3-202ENST00000577725 SPNP16150 400 aa8.47□□□□□ -1.05
CRLF3-202ENST00000577725 HIST1H1DP16402 221 aaKnown RBP8.47□□□□□ -1.05
CRLF3-202ENST00000577725 CPT2P23786 658 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms