RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 PSMD7P51665 324 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 TOMM34Q15785 309 aaPredicted RBP1.47□□□□□ -2.17
COPS3-213ENST00000577210 CEACAM21Q3KPI0 293 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 FBXL19-AS1Q494R0 122 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 LUZP6Q538Z0 58 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 RNASE13Q5GAN3 156 aaKnown RBP1.47□□□□□ -2.17
COPS3-213ENST00000577210 TEX30Q5JUR7 227 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 CLEC6AQ6EIG7 209 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 ZNF773Q6PK81 442 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 CLEC19AQ6UXS0 136 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 SSX7Q7RTT5 188 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 MRPL52Q86TS9 123 aaKnown RBP1.47□□□□□ -2.17
COPS3-213ENST00000577210 PDPNQ86YL7 162 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 ZNF615Q8N8J6 731 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 OR2M7Q8NG81 312 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 OR6K3Q8NGY3 331 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 OR1L1Q8NH94 360 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 LINC01560Q8TB33 94 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 DYNC2LI1Q8TCX1 351 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 PHF10Q8WUB8 498 aaKnown RBP1.47□□□□□ -2.17
COPS3-213ENST00000577210 CPNE4Q96A23 557 aaPredicted RBP1.47□□□□□ -2.17
COPS3-213ENST00000577210 FXYD5Q96DB9 178 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 ARL5BQ96KC2 179 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 TMEM56Q96MV1 263 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 LINC01587Q99440 93 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 C1orf50Q9BV19 199 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 SCRT1Q9BWW7 348 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 SHCBP1LQ9BZQ2 653 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 SLC19A3Q9BZV2 496 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 ZNF436Q9C0F3 470 aaPredicted RBP1.47□□□□□ -2.17
COPS3-213ENST00000577210 SLC25A31Q9H0C2 315 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 FBXL15Q9H469 300 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 METTL17Q9H7H0 456 aaPredicted RBP1.47□□□□□ -2.17
COPS3-213ENST00000577210 RDH14Q9HBH5 336 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 PARP11Q9NR21 331 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 C21orf62Q9NYP8 219 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 NKIRAS1Q9NYS0 192 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 TAS2R5Q9NYW4 299 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 RAB22AQ9UL26 194 aa1.47□□□□□ -2.17
COPS3-213ENST00000577210 NUP153P49790 1475 aaKnown RBP1.47□□□□□ -2.17
COPS3-213ENST00000577210 NPHP4O75161 1426 aaPredicted RBP1.47□□□□□ -2.17
COPS3-213ENST00000577210 ZNFX1Q9P2E3 1918 aaKnown RBP1.46□□□□□ -2.18
COPS3-213ENST00000577210 IGHV3-49A0A0A0MS15 119 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 IGKV1-6A0A0C4DH72 117 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 IGHV7-4-1A0A0J9YVY3 117 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 OR2AT4A6NND4 320 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 ITGB1BP1O14713 200 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 UBDO15205 165 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 FABP7O15540 132 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 COCHO43405 550 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 ZNF207O43670 478 aaKnown RBP1.46□□□□□ -2.18
COPS3-213ENST00000577210 E2F6O75461 281 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 CCNKO75909 580 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 IGKV1-39P01597 117 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 IGKV1D-39P04432 117 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 LINC00869P0C866 280 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 LIMS3P0CW19 117 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 LIMS4P0CW20 117 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 SPNP16150 400 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 PSMB9P28065 219 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 S100A2P29034 98 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 TSPOP30536 169 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 GRPRP30550 384 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 CLDN12P56749 244 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 TAS2R43P59537 309 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 HBG1P69891 147 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 HBG2P69892 147 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 PITPNAQ00169 270 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 PRDX1Q06830 199 aaKnown RBP1.46□□□□□ -2.18
COPS3-213ENST00000577210 ZNF816Q0VGE8 651 aaPredicted RBP1.46□□□□□ -2.18
COPS3-213ENST00000577210 ELOCQ15369 112 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 SSX1Q16384 188 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 KLHL12Q53G59 568 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 UBE2NLQ5JXB2 153 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 RBM48Q5RL73 367 aaKnown RBP1.46□□□□□ -2.18
COPS3-213ENST00000577210 SLC25A34Q6PIV7 304 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 PLEKHG7Q6ZR37 379 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 LINC00596Q86U02 117 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 SPICQ8N5J4 248 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 NECAP1Q8NC96 275 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 APCDD1LQ8NCL9 501 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 OR5AK3PQ8NH89 298 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 ENKURQ8TC29 256 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 ORAOV1Q8WV07 137 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 TNFRSF14Q92956 283 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 SLC25A46Q96AG3 418 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 YIPF6Q96EC8 236 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 MRAP2Q96G30 205 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 SMARCD1Q96GM5 515 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 PITX2Q99697 317 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 ANAPC13Q9BS18 74 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 ANGPTL4Q9BY76 406 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 TBL1XR1Q9BZK7 514 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 MFSD1Q9H3U5 465 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 ASB7Q9H672 318 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 IMP3Q9NV31 184 aaKnown RBP1.46□□□□□ -2.18
COPS3-213ENST00000577210 RBM12B-AS1Q9P1G2 102 aa1.46□□□□□ -2.18
COPS3-213ENST00000577210 USP42Q9H9J4 1324 aaKnown RBP1.45□□□□□ -2.18
COPS3-213ENST00000577210 SPRR5A0A1B0GTR4 108 aa1.45□□□□□ -2.18
COPS3-213ENST00000577210 A0A1B0GXF2 115 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms