RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 PRSS48Q7RTY5 328 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 ZNF573Q86YE8 665 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 DNAAF1Q8NEP3 725 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 OR52N4Q8NGI2 321 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 GPR148Q8TDV2 347 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 BORCS8Q96FH0 119 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 DERL3Q96Q80 235 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 SSBP3Q9BWW4 388 aaPredicted RBP7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 PKIBQ9C010 78 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 CCDC90BQ9GZT6 254 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 ELL3Q9HB65 397 aaPredicted RBP7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 RBFOX1Q9NWB1 397 aaKnown RBP7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 NLKQ9UBE8 527 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 MIOXQ9UGB7 285 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 KCNS2Q9ULS6 477 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 ERGIC3Q9Y282 383 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 MAB21L2Q9Y586 359 aa7.83□□□□□ -1.16
NPLOC4-219ENST00000576713 LOC105371242A0A075B767 164 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 TRAV38-1A0A0B4J264 116 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 OR2AT4A6NND4 320 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 NPIPB6E9PJ23 425 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 GABRPO00591 440 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 SULT1B1O43704 296 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 SC5DO75845 299 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 SFTPBP07988 381 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 RPSAP08865 295 aaKnown RBP7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 MUC1P15941 1255 aaPredicted RBP7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 PCMT1P22061 227 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 POU3F4P49335 361 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 RBP2P50120 134 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 MTCP1P56278 107 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 RPS25P62851 125 aaKnown RBP7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 EMX1Q04741 257 aaPredicted RBP7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 PDZK1IP1Q13113 114 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 MED21Q13503 144 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 CNN3Q15417 329 aaKnown RBP7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 KISS1Q15726 138 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 ZNF124Q15973 351 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 SSX1Q16384 188 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 MICBQ29980 383 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 ESCO2Q56NI9 601 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 YIF1BQ5BJH7 314 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 ATPAF1Q5TC12 328 aaPredicted RBP7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 LIPKQ5VXJ0 399 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 FAHD2BQ6P2I3 314 aaPredicted RBP7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 TMEM91Q6ZNR0 172 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 GLCCI1Q86VQ1 547 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 LYPD6Q86Y78 171 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 SERPINA12Q8IW75 414 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 SPARTQ8N0X7 666 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 ZNRF1Q8ND25 227 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 OR8B3Q8NGG8 313 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 HAVCR2Q8TDQ0 301 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 SPSB1Q96BD6 273 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 TMIGD2Q96BF3 282 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 FAHD2AQ96GK7 314 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 TECTBQ96PL2 329 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 OR8B2Q96RD0 313 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 MYCBPQ99417 103 aaPredicted RBP7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 TMED9Q9BVK6 235 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 ACOT13Q9NPJ3 140 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 ZNF581Q9P0T4 197 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 KAAG1Q9UBP8 84 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 SLC7A11Q9UPY5 501 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 LRCH1Q9Y2L9 728 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 INSIG2Q9Y5U4 225 aa7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 SOX21Q9Y651 276 aaPredicted RBP7.82□□□□□ -1.16
NPLOC4-219ENST00000576713 RFPL4AA6NLU0 287 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 ZNF879B4DU55 563 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 RFPL4AL1F8VTS6 287 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 NXPH2O95156 264 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 SERPINA3P01011 423 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 FSHBP01225 129 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 CD1AP06126 327 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 ACAA1P09110 424 aaPredicted RBP7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 HSMCR30P0CW71 290 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 EEF1B2P24534 225 aaKnown RBP7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 DUSP1P28562 367 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 OR3A4PP47883 348 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 SNU13P55769 128 aaKnown RBP7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 DLX1P56177 255 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 TAS2R43P59537 309 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 GABARAPL2P60520 117 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 GNB2P62879 340 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 BDH1Q02338 343 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 PRB3Q04118 309 aaPredicted RBP7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 TPBGQ13641 420 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 TBCEQ15813 527 aaPredicted RBP7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 Q499Y3 187 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 KLF17Q5JT82 389 aaPredicted RBP7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 PRR31Q5SQ13 230 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 DCAF12L2Q5VW00 463 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 METAP1DQ6UB28 335 aaPredicted RBP7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 UNQ9370/PRO34162Q6UXP9 181 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 CLRN3Q8NCR9 226 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 OR5D14Q8NGL3 314 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 ZNF671Q8TAW3 534 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 ST8SIA4Q92187 359 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 TMEM203Q969S6 136 aa7.81□□□□□ -1.16
NPLOC4-219ENST00000576713 C12orf43Q96C57 262 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms