RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 OR2C3Q8N628 320 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 CD177Q8N6Q3 437 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 C11orf44Q8N8P7 122 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 ZNRF1Q8ND25 227 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 TMEM185AQ8NFB2 350 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 OR10Z1Q8NGY1 313 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 C8orf46Q8TAG6 207 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 C12orf43Q96C57 262 aaKnown RBP5.06□□□□□ -1.6
NUP88-212ENST00000576708 THTPAQ9BU02 230 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 MMP27Q9H306 513 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 OR51I2Q9H344 312 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 DPAGT1Q9H3H5 408 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 C16orf95Q9H693 158 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 C19orf12Q9NSK7 152 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 PPP1R14DQ9NXH3 145 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 NLKQ9UBE8 527 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 ZNF222Q9UK12 451 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 VPREB3Q9UKI3 123 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 COPS3Q9UNS2 423 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 FOXJ3Q9UPW0 622 aa5.06□□□□□ -1.6
NUP88-212ENST00000576708 CAB39Q9Y376 341 aaPredicted RBP5.06□□□□□ -1.6
NUP88-212ENST00000576708 BTBD17A6NE02 478 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 CCDC182A6NF36 153 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 ANKRD61A6NGH8 418 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 A6NIN4 97 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 H0YAE9 185 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 M0R129 80 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 SIGLEC5O15389 551 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 TXNL1O43396 289 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 ANGPTL7O43827 346 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 TSPAN9O75954 239 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 PRB2P02812 416 aaPredicted RBP5.05□□□□□ -1.6
NUP88-212ENST00000576708 EGR2P11161 476 aaPredicted RBP5.05□□□□□ -1.6
NUP88-212ENST00000576708 PAICSP22234 425 aaKnown RBP5.05□□□□□ -1.6
NUP88-212ENST00000576708 COX7A1P24310 79 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 MNAT1P51948 309 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 UBE2E1P51965 193 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 CAPZA1P52907 286 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 RPL15P61313 204 aaKnown RBP5.05□□□□□ -1.6
NUP88-212ENST00000576708 RPS16P62249 146 aaKnown RBP5.05□□□□□ -1.6
NUP88-212ENST00000576708 MFGE8Q08431 387 aaPredicted RBP5.05□□□□□ -1.6
NUP88-212ENST00000576708 APOFQ13790 326 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 FAM76BQ5HYJ3 339 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 HAGHLQ6PII5 290 aaPredicted RBP5.05□□□□□ -1.6
NUP88-212ENST00000576708 TRPM8Q7Z2W7 1104 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 COMMD2Q86X83 199 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 LYG1Q8N1E2 194 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 OR4M1Q8NGD0 313 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 FAM81AQ8TBF8 368 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 OR51E1Q8TCB6 317 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 CANT1Q8WVQ1 401 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 ASB9Q96DX5 294 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 MED30Q96HR3 178 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 HIST1H2AAQ96QV6 131 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 TEAD3Q99594 435 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 SSX3Q99909 188 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 APOL4Q9BPW4 351 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 PBOV1Q9GZY1 135 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 DNTTIP1Q9H147 329 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 MUC13Q9H3R2 512 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 RGCCQ9H4X1 137 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 NIPAL2Q9H841 368 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 GPR84Q9NQS5 396 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 FAM206AQ9NX38 181 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 TVP23BQ9NYZ1 205 aa5.05□□□□□ -1.6
NUP88-212ENST00000576708 TGP01266 2768 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 A0A087WWL8 130 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 TMEM269A0A1B0GVZ9 245 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 ARRDC5A6NEK1 342 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 RFPL4AA6NLU0 287 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 RFPL4AL1F8VTS6 287 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 G3V4G9 280 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 H3BSH0 61 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 M0R1W7 72 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 SYNGR1O43759 233 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 CHST1O43916 411 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 PRKYO43930 277 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 HMGN1P05114 100 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 S100A6P06703 90 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 PIPP12273 146 aaPredicted RBP5.04□□□□□ -1.6
NUP88-212ENST00000576708 CCL3L1P16619 93 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 CALB2P22676 271 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 GABRA5P31644 462 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 TGFBR2P37173 567 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 RAB13P51153 203 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 BMXP51813 675 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 GTF2A1P52655 376 aaPredicted RBP5.04□□□□□ -1.6
NUP88-212ENST00000576708 CAV3P56539 151 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 GNG3P63215 75 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 CBX1P83916 185 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 BLMHQ13867 455 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 ZNF273Q14593 569 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 SNCBQ16143 134 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 SNAPC1Q16533 368 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 CEACAM21Q3KPI0 293 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 PLA1AQ53H76 456 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 SLC35D3Q5M8T2 416 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 PLCXD3Q63HM9 321 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 NCR3LG1Q68D85 454 aa5.04□□□□□ -1.6
NUP88-212ENST00000576708 ACP7Q6ZNF0 438 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms