RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CDS2O95674 445 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 ACAA1P09110 424 aaPredicted RBP11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 FCARP24071 287 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 RPS11P62280 158 aaKnown RBP eCLIP11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 SLC38A11Q08AI6 406 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 MGAT2Q10469 447 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 YRDCQ86U90 279 aaKnown RBP11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 AQP3Q92482 292 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 ATP5SQ99766 215 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 MYOZ1Q9NP98 299 aaPredicted RBP11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 TREM2Q9NZC2 230 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 RPH3ALQ9UNE2 315 aa11.59□□□□□ -0.55
PCDHGB3-201ENST00000576222 TRAV14DV4A0A0A6YYC5 116 aa11.58□□□□□ -0.55
PCDHGB3-201ENST00000576222 SPTY2D1-AS1A0A0U1RR47 76 aa11.58□□□□□ -0.55
PCDHGB3-201ENST00000576222 DUXBA0A1W2PPF3 345 aa11.58□□□□□ -0.55
PCDHGB3-201ENST00000576222 NPIPB9F8W1W9 429 aa11.58□□□□□ -0.55
PCDHGB3-201ENST00000576222 MPPED1O15442 326 aa11.58□□□□□ -0.55
PCDHGB3-201ENST00000576222 DEDDO75618 318 aa11.58□□□□□ -0.55
PCDHGB3-201ENST00000576222 RPS4Y1P22090 263 aaKnown RBP11.58□□□□□ -0.55
PCDHGB3-201ENST00000576222 GABRA4P48169 554 aa11.58□□□□□ -0.55
PCDHGB3-201ENST00000576222 KHDC3LQ587J8 217 aa11.58□□□□□ -0.55
PCDHGB3-201ENST00000576222 OR13G1Q8NGZ3 307 aa11.58□□□□□ -0.55
PCDHGB3-201ENST00000576222 OR1F12Q8NHA8 337 aa11.58□□□□□ -0.55
PCDHGB3-201ENST00000576222 FKBP11Q9NYL4 201 aa11.58□□□□□ -0.55
PCDHGB3-201ENST00000576222 RNF222A6NCQ9 220 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 SIRPB1O00241 398 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 TTRP02766 147 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 MYOGP15173 224 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 VDAC1P21796 283 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZNF154Q13106 437 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 ANKRD55Q3KP44 614 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 FAM78BQ5VT40 261 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 NOL4LQ96MY1 436 aaPredicted RBP11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 DUSP23Q9BVJ7 150 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 CACNG5Q9UF02 275 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 H0Y8G0 127 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 SPINT2O43291 252 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 CD27P26842 260 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 ROM1Q03395 351 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 SHHQ15465 462 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZNF385CQ66K41 422 aaPredicted RBP11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZNF880Q6PDB4 577 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 TMPRSS7Q7RTY8 843 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZNF573Q86YE8 665 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZDHHC23Q8IYP9 409 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 M1APQ8TC57 530 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 SOX7Q9BT81 388 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 LPAR5Q9H1C0 372 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 SLC25A22Q9H936 323 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 LYRM2Q9NU23 88 aaPredicted RBP11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 VAX2Q9UIW0 290 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 NKX2-6A6NCS4 301 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 ADAM11O75078 769 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 TGIF1Q15583 401 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 FFAR4Q5NUL3 377 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 DGAT2L6Q6ZPD8 337 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 SLC2A8Q9NY64 477 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 ERRFI1Q9UJM3 462 aaPredicted RBP11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 HSF4Q9ULV5 492 aa11.58□□□□□ -0.56
PCDHGB3-201ENST00000576222 TDRD15B5MCY1 1934 aaKnown RBP11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 M0QZK8 103 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 GGCTO75223 188 aaKnown RBP11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 GRPP07492 148 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 IRF2P14316 349 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 MDKP21741 143 aaPredicted RBP11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 LANCL3Q6ZV70 420 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 IP6K3Q96PC2 410 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 SARGQ9BW04 601 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 REG4Q9BYZ8 158 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 FUT9Q9Y231 359 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 BCAT2O15382 392 aaPredicted RBP11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 IL9P15248 144 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 EFNB1P98172 346 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 TBC1D26Q86UD7 250 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 NAT6Q93015 286 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 MMP17Q9ULZ9 603 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZNF732B4DXR9 585 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 ZNF17P17021 662 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 OR5AS1Q8N127 324 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 NEIL1Q96FI4 390 aaPredicted RBP11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 TECTBQ96PL2 329 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 IL17BQ9UHF5 180 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 A0A1B0GV90 55 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 C5orf49A4QMS7 147 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 LILRA5A6NI73 299 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 CLN5O75503 358 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 KRASP01116 189 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 PMCHP20382 165 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 CCR5P51681 352 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 MZT1Q08AG7 82 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 COTL1Q14019 142 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 C16orf47Q6ZP98 133 aaPredicted RBP11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 ALKBH3Q96Q83 286 aaPredicted RBP11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 C5orf66Q9H5L9 145 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 B3GAT1Q9P2W7 334 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 CACFD1Q9UGQ2 172 aa11.57□□□□□ -0.56
PCDHGB3-201ENST00000576222 A0A1W2PP11 408 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 CXCL13O43927 109 aa11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 HOXC4P09017 264 aaPredicted RBP11.56□□□□□ -0.56
PCDHGB3-201ENST00000576222 OR4C5Q8NGB2 326 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms