RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 MAGEB3O15480 346 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 ANGPTL7O43827 346 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 CD5LO43866 347 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 LHBP01229 141 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 IGKV1D-12P01611 117 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 CD2P06729 351 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 PPIAL4FP0DN26 164 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 SNRPBP14678 240 aaKnown RBP6.59□□□□□ -1.35
CCDC40-215ENST00000576033 RPS2P15880 293 aaKnown RBP6.59□□□□□ -1.35
CCDC40-215ENST00000576033 ZNF20P17024 532 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 AZGP1P25311 298 aaKnown RBP6.59□□□□□ -1.35
CCDC40-215ENST00000576033 NPBWR2P48146 333 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 POU3F4P49335 361 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 DLX1P56177 255 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 TMEM33P57088 247 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 GNG3P63215 75 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 TRIM16LQ309B1 348 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 UBE2NLQ5JXB2 153 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 C1orf100Q5SVJ3 147 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 BAIAP2L2Q6UXY1 529 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 GDPD3Q7L5L3 318 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 KRT74Q7RTS7 529 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 CELF2-AS1Q8N7Q2 184 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 SAMD12Q8N8I0 201 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 OR11L1Q8NGX0 322 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 LGALS14Q8TCE9 139 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 SLC25A28Q96A46 364 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 CCL13Q99616 98 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 SLC22A4Q9H015 551 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 SLITRK2Q9H156 845 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 KCNK15Q9H427 330 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 MMP26Q9NRE1 261 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 YAE1D1Q9NRH1 226 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 C14orf119Q9NWQ9 140 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 EXTL2Q9UBQ6 330 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 OR5V1Q9UGF6 321 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 DHDHQ9UQ10 334 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 PPIAL4AQ9Y536 164 aa6.59□□□□□ -1.35
CCDC40-215ENST00000576033 HIVEP2P31629 2446 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 MEGF11A6BM72 1044 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 OOEPA6NGQ2 149 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 C22orf46C9J442 243 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 TRAPPC2LH3BP13 241 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 SLC17A2O00624 439 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 LDLRAD4O15165 306 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 PLA2G10O15496 165 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 GSTZ1O43708 216 aaPredicted RBP6.58□□□□□ -1.36
CCDC40-215ENST00000576033 MTRF1O75570 445 aaKnown RBP6.58□□□□□ -1.36
CCDC40-215ENST00000576033 ALX3O95076 343 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 TGFAP01135 160 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 AVPP01185 164 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 OCMP0CE72 109 aaPredicted RBP6.58□□□□□ -1.36
CCDC40-215ENST00000576033 IRF2P14316 349 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 BCL3P20749 454 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 MDH2P40926 338 aaKnown RBP6.58□□□□□ -1.36
CCDC40-215ENST00000576033 OR3A4PP47883 348 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 RFX2P48378 723 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 DEFA1P59665 94 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 DEFA3P59666 94 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 SRSF2Q01130 221 aaKnown RBP6.58□□□□□ -1.36
CCDC40-215ENST00000576033 IKZF1Q13422 519 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 ZBTB37Q5TC79 503 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 HACD4Q5VWC8 232 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 STUMQ69YW2 141 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 PYHIN1Q6K0P9 492 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 ZNF841Q6ZN19 808 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 C1orf229Q6ZS94 237 aaPredicted RBP6.58□□□□□ -1.36
CCDC40-215ENST00000576033 C1QL2Q7Z5L3 287 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 BIVMQ86UB2 503 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 FTMTQ8N4E7 242 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 NKAIN3Q8N8D7 197 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 CCDC54Q8NEL0 328 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 DNAAF1Q8NEP3 725 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 OR52N4Q8NGI2 321 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 RAB1CQ92928 201 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 TIMD4Q96H15 378 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 C1orf159Q96HA4 380 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 GAFA1Q96PS6 74 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 ABHD1Q96SE0 405 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 LIN7BQ9HAP6 207 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 PATZ1Q9HBE1 687 aaKnown RBP6.58□□□□□ -1.36
CCDC40-215ENST00000576033 RBFOX1Q9NWB1 397 aaKnown RBP6.58□□□□□ -1.36
CCDC40-215ENST00000576033 MTCH1Q9NZJ7 389 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 STEAP1Q9UHE8 339 aa6.58□□□□□ -1.36
CCDC40-215ENST00000576033 IGKV1D-17A0A075B6S4 117 aa6.57□□□□□ -1.36
CCDC40-215ENST00000576033 IGHV3OR16-10A0A075B7F0 116 aa6.57□□□□□ -1.36
CCDC40-215ENST00000576033 A0A0G2JMP0 313 aa6.57□□□□□ -1.36
CCDC40-215ENST00000576033 A0A0X1KG70 313 aa6.57□□□□□ -1.36
CCDC40-215ENST00000576033 A0A1W2PP11 408 aa6.57□□□□□ -1.36
CCDC40-215ENST00000576033 FUOMA2VDF0 154 aa6.57□□□□□ -1.36
CCDC40-215ENST00000576033 OR5B21A6NL26 309 aa6.57□□□□□ -1.36
CCDC40-215ENST00000576033 TMEM210A6NLX4 147 aa6.57□□□□□ -1.36
CCDC40-215ENST00000576033 LRRC30A6NM36 301 aa6.57□□□□□ -1.36
CCDC40-215ENST00000576033 DHRS7CA6NNS2 312 aa6.57□□□□□ -1.36
CCDC40-215ENST00000576033 J3QT63 122 aa6.57□□□□□ -1.36
CCDC40-215ENST00000576033 LGALS8O00214 317 aa6.57□□□□□ -1.36
CCDC40-215ENST00000576033 TNFRSF13BO14836 293 aaPredicted RBP6.57□□□□□ -1.36
CCDC40-215ENST00000576033 ADAM20O43506 726 aa6.57□□□□□ -1.36
CCDC40-215ENST00000576033 SULT1B1O43704 296 aa6.57□□□□□ -1.36
CCDC40-215ENST00000576033 MSMBP08118 114 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms