RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 A0A0B4J2A0 478 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 FAM90A10PA6NDY2 464 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 FAM90A18PA6NE21 464 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 FAM90A16PA6NEW6 464 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 FAM90A20PA6NIJ5 464 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 FAM90A8PA6NJQ4 464 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 FAM90A7PA6NKC0 464 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 FAM90A22PA8MWA6 464 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 FAM90A12PA8MX19 464 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 FAM90A5PA8MXJ8 464 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 FAM90A23PA8MXZ1 464 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 CEACAM4O75871 244 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 ZNF205O95201 554 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 CRHP06850 196 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 FAM90A15PP0C7V4 464 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 FAM90A13PP0C7W8 464 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 FAM90A14PP0C7W9 464 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 FAM90A24PP0C7X0 464 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 SPINK2P20155 84 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 IDH3GP51553 393 aaPredicted RBP12.05□□□□□ -0.48
VPS33B-208ENST00000574755 CYCSP99999 105 aaKnown RBP12.05□□□□□ -0.48
VPS33B-208ENST00000574755 HAGHLQ6PII5 290 aaPredicted RBP12.05□□□□□ -0.48
VPS33B-208ENST00000574755 ZADH2Q8N4Q0 377 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 OR6K3Q8NGY3 331 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 TOMM40LQ969M1 308 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 MARS2Q96GW9 593 aaKnown RBP12.05□□□□□ -0.48
VPS33B-208ENST00000574755 NMES1Q9C002 83 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 LIME1Q9H400 295 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 METTL8Q9H825 291 aaKnown RBP12.05□□□□□ -0.48
VPS33B-208ENST00000574755 SHPKQ9UHJ6 478 aa12.05□□□□□ -0.48
VPS33B-208ENST00000574755 SYNGR1O43759 233 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 SPDEFO95238 335 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 CA6P23280 308 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 PSMB6P28072 239 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 NBL1P41271 181 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 ZNF345Q14585 488 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 ESCO2Q56NI9 601 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 TMEM211Q6ICI0 200 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 DHRS11Q6UWP2 260 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 SLC51BQ86UW2 128 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 HS3ST6Q96QI5 342 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 DECR2Q9NUI1 292 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 MBD2Q9UBB5 411 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 IL36RNQ9UBH0 155 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 ESPL1Q14674 2120 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 OR5B21A6NL26 309 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 TM4SF5O14894 197 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 OR2F2O95006 317 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 IFNA2P01563 188 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 CTSDP07339 412 aaPredicted RBP12.04□□□□□ -0.48
VPS33B-208ENST00000574755 PTGER4P35408 488 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 GNG3P63215 75 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 OR2F1Q13607 317 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 RTP5Q14D33 572 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 GUSBP1Q15486 140 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 SGPP2Q8IWX5 399 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 CCDC36Q8IYA8 594 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 C9orf106Q8NAJ2 232 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 EXTL1Q92935 676 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 CCDC120Q96HB5 630 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 VRK1Q99986 396 aaPredicted RBP12.04□□□□□ -0.48
VPS33B-208ENST00000574755 WDR13Q9H1Z4 485 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 CDH20Q9HBT6 801 aa12.04□□□□□ -0.48
VPS33B-208ENST00000574755 TEX13DA0A0J9YY54 714 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-208ENST00000574755 KANTRA0A1W2PQU2 76 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 RNF222A6NCQ9 220 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 MPTX1A8MV57 137 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 B3GALNT1O75752 331 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 RBMXP38159 391 aaKnown RBP12.03□□□□□ -0.48
VPS33B-208ENST00000574755 PMELP40967 661 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 FXYD4P59646 89 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 ZNF169Q14929 603 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-208ENST00000574755 TSC22D1Q15714 1073 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 GABRA6Q16445 453 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 BEX5Q5H9J7 111 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 VWA1Q6PCB0 445 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 ACOT7LQ6ZUV0 252 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 ZNF573Q86YE8 665 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 KCNRGQ8N5I3 272 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 INO80EQ8NBZ0 244 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-208ENST00000574755 SCARB1Q8WTV0 552 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 TAAR6Q96RI8 345 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 TUBAL3A6NHL2 446 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 J3QW42 95 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 HSPB6O14558 160 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 SMPD2O60906 423 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 ZNF728P0DKX0 622 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 PRKACAP17612 351 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 CALCRP30988 508 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 HOXC12P31275 282 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 FCGR2CP31995 323 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 KIR2DL2P43627 348 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-208ENST00000574755 MPV17LQ2QL34 196 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 PLEKHN1Q494U1 663 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-208ENST00000574755 Q6ZPA2 131 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 COMMD7Q86VX2 200 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 WNT2BQ93097 391 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 OR2J1Q9GZK6 312 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 PLSCR2Q9NRY7 297 aa12.03□□□□□ -0.48
VPS33B-208ENST00000574755 AUP1Q9Y679 476 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms