RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 GINS1Q14691 196 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 SLC35D3Q5M8T2 416 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 TPTE2P1Q5T6R2 138 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 OR2T5Q6IEZ7 315 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 DEGS2Q6QHC5 323 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 PLEKHG7Q6ZR37 379 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 PGAM4Q8N0Y7 254 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 OR14K1Q8NGZ2 314 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 OR2T29Q8NH02 315 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 EMG1Q92979 244 aaKnown RBP13.85□□□□□ -0.19
CCDC40-211ENST00000574099 FEVQ99581 238 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 ZNF286AQ9HBT8 521 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 ARRDC5A6NEK1 342 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 IGLV1-47P01700 117 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 CALCBP10092 127 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 SLC2A5P22732 501 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 CDK2P24941 298 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 RBM39Q14498 530 aaKnown RBP13.84□□□□□ -0.19
CCDC40-211ENST00000574099 DEFB136Q30KP8 78 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 BCL2L15Q5TBC7 163 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 SLX4IPQ5VYV7 408 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 CD300LDQ6UXZ3 194 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 RTN4RL2Q86UN3 420 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 EGFL6Q8IUX8 553 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 ZNF695Q8IW36 515 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 ZNF679Q8IYX0 411 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 Q8NFD4 153 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 CHPT1Q8WUD6 406 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 RAX2Q96IS3 184 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 YIPF3Q9GZM5 350 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 CCDC134Q9H6E4 229 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 ZFP57Q9NU63 452 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 DNAJB9Q9UBS3 223 aa13.84□□□□□ -0.19
CCDC40-211ENST00000574099 HUWE1Q7Z6Z7 4374 aaKnown RBP13.84□□□□□ -0.19
CCDC40-211ENST00000574099 IGKV1-27A0A075B6S5 117 aa13.83□□□□□ -0.2
CCDC40-211ENST00000574099 SERPINE3A8MV23 424 aa13.83□□□□□ -0.2
CCDC40-211ENST00000574099 CCL24O00175 119 aa13.83□□□□□ -0.2
CCDC40-211ENST00000574099 MAGEB4O15481 346 aaPredicted RBP13.83□□□□□ -0.2
CCDC40-211ENST00000574099 P2RX3P56373 397 aa13.83□□□□□ -0.2
CCDC40-211ENST00000574099 KIAA2026Q5HYC2 2103 aa13.83□□□□□ -0.2
CCDC40-211ENST00000574099 OR52W1Q6IF63 320 aa13.83□□□□□ -0.2
CCDC40-211ENST00000574099 SLC25A26Q70HW3 274 aa13.83□□□□□ -0.2
CCDC40-211ENST00000574099 GAL3ST2Q9H3Q3 398 aa13.83□□□□□ -0.2
CCDC40-211ENST00000574099 SLC7A11Q9UPY5 501 aa13.83□□□□□ -0.2
CCDC40-211ENST00000574099 UBE2J1Q9Y385 318 aaPredicted RBP13.83□□□□□ -0.2
CCDC40-211ENST00000574099 A0A1B0GTI1 187 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 BUB1B-PAK6H3BSN5 160 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 TOR1AO14656 332 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 MGST3O14880 152 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 ZNF254O75437 659 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 SRSF10O75494 262 aaKnown RBP13.82□□□□□ -0.2
CCDC40-211ENST00000574099 SLC6A1P30531 599 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 CEACAM3P40198 252 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 MNDAP41218 407 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 OR3A1P47881 315 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 ROM1Q03395 351 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 ZNF91Q05481 1191 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 ODF4Q2M2E3 257 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 HLA-DRB5Q30154 266 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 C9orf66Q5T8R8 295 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 GIPC3Q8TF64 312 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 RBFOX1Q9NWB1 397 aaKnown RBP13.82□□□□□ -0.2
CCDC40-211ENST00000574099 OR52A1Q9UKL2 312 aa13.82□□□□□ -0.2
CCDC40-211ENST00000574099 TRGV10A0A0A0MS01 117 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 LCE6AA0A183 80 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 TCRBV5S2A0A599 114 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 SIRPB1O00241 398 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 FAM106CPP0CH98 169 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 SLC35B1P78383 322 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 DOC2BQ14184 412 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 HES1Q14469 280 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 UTF1Q5T230 341 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 TMEM236Q5W0B7 351 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 HEPN1Q6WQI6 88 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 ELMOD2Q8IZ81 293 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 DEFB107AQ8IZN7 70 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 OR5M8Q8NGP6 311 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 OR56B4Q8NH76 319 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 RCHY1Q96PM5 261 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 APOL4Q9BPW4 351 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 ELAC2Q9BQ52 826 aaKnown RBP13.81□□□□□ -0.2
CCDC40-211ENST00000574099 MAGIXQ9H6Y5 334 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 MOB1AQ9H8S9 216 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 PLEKHA1Q9HB21 404 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 PALMDQ9NP74 551 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 ING3Q9NXR8 418 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 R4GMQ9 66 aa13.81□□□□□ -0.2
CCDC40-211ENST00000574099 CCDC182A6NF36 153 aa13.8□□□□□ -0.2
CCDC40-211ENST00000574099 SEC14L6B5MCN3 397 aa13.8□□□□□ -0.2
CCDC40-211ENST00000574099 LY86O95711 162 aa13.8□□□□□ -0.2
CCDC40-211ENST00000574099 HMGN1P05114 100 aa13.8□□□□□ -0.2
CCDC40-211ENST00000574099 BCL3P20749 454 aa13.8□□□□□ -0.2
CCDC40-211ENST00000574099 CHATP28329 748 aa13.8□□□□□ -0.2
CCDC40-211ENST00000574099 NPBWR2P48146 333 aa13.8□□□□□ -0.2
CCDC40-211ENST00000574099 GP2P55259 537 aaKnown RBP13.8□□□□□ -0.2
CCDC40-211ENST00000574099 UBE2V2Q15819 145 aa13.8□□□□□ -0.2
CCDC40-211ENST00000574099 CCDC144NLQ6NUI1 221 aa13.8□□□□□ -0.2
CCDC40-211ENST00000574099 LCNL1Q6ZST4 164 aa13.8□□□□□ -0.2
CCDC40-211ENST00000574099 C5orf56Q8N8D9 126 aa13.8□□□□□ -0.2
CCDC40-211ENST00000574099 ASB17Q8WXJ9 295 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms