RNA–Protein interactions for RNA: ENST00000574087.1

NUP88-208, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-208ENST00000574087 ZNF763Q0D2J5 394 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 ARFRP1Q13795 201 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 PRPSAP1Q14558 356 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 MAPK14Q16539 360 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 RPEL1Q2QD12 228 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 SMIM21Q3B7S5 101 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 ZBED5Q49AG3 693 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 TP53I3Q53FA7 332 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 PAGE3Q5JUK9 113 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 GPRC6AQ5T6X5 926 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 UBE2UQ5VVX9 321 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 TIFABQ6ZNK6 161 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 OR2W3Q7Z3T1 314 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 MRPL52Q86TS9 123 aaKnown RBP2.97□□□□□ -1.93
NUP88-208ENST00000574087 RDH10Q8IZV5 341 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 C6orf223Q8N319 242 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 ARRDC1Q8N5I2 433 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 JAGN1Q8N5M9 183 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 LRRC52Q8N7C0 313 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 OR10G3Q8NGC4 313 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 OR4D9Q8NGE8 314 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 OR56A4Q8NGH8 313 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 OR10A6Q8NH74 314 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 SYNPRQ8TBG9 265 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 FAM45AQ8TCE6 357 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 CASTOR1Q8WTX7 329 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 GHSRQ92847 366 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 TM4SF18Q96CE8 201 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 FLYWCH2Q96CP2 140 aaKnown RBP2.97□□□□□ -1.93
NUP88-208ENST00000574087 OR10C1Q96KK4 312 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 PPP3R2Q96LZ3 170 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 KCNA7Q96RP8 456 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 CNN2Q99439 309 aaKnown RBP2.97□□□□□ -1.93
NUP88-208ENST00000574087 CHRNA10Q9GZZ6 450 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 MIXL1Q9H2W2 232 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 Q9H521 79 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 DHX35Q9H5Z1 703 aaKnown RBP2.97□□□□□ -1.93
NUP88-208ENST00000574087 UBE2ZQ9H832 354 aaPredicted RBP2.97□□□□□ -1.93
NUP88-208ENST00000574087 SLC25A22Q9H936 323 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 BEX1Q9HBH7 125 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 SLC17A5Q9NRA2 495 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 GNPTGQ9UJJ9 305 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 ASF1AQ9Y294 204 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 PPRC1Q5VV67 1664 aaKnown RBP2.97□□□□□ -1.93
NUP88-208ENST00000574087 ADGBQ8N7X0 1667 aa2.97□□□□□ -1.93
NUP88-208ENST00000574087 ABCB11O95342 1321 aa2.96□□□□□ -1.93
NUP88-208ENST00000574087 HECW2Q9P2P5 1572 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 PTPRTO14522 1441 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 PRORSD1PA6NEY8 169 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 OR6C6A6NF89 314 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 CCDC160A6NGH7 325 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 SMIM9A6NGZ8 99 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 SIGLEC16A6NMB1 481 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 J3QLI3 93 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 RGS5O15539 181 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 CHST10O43529 356 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 FKBP6O75344 327 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 EIF3GO75821 320 aaKnown RBP eCLIP2.96□□□□□ -1.94
NUP88-208ENST00000574087 LRATO95237 230 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 GPR75O95800 540 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 BCHEP06276 602 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 OR10J4P0C629 311 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 METTL15P1P0C7V9 234 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 RBMY1CP0DJD4 496 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 HIST1H1EP10412 219 aaKnown RBP2.96□□□□□ -1.94
NUP88-208ENST00000574087 GPX2P18283 190 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 CELP19835 753 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 HTR1FP30939 366 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 KLK7P49862 253 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 HMGCS1Q01581 520 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 EMX2Q04743 252 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 MAD2L1BPQ15013 274 aaPredicted RBP2.96□□□□□ -1.94
NUP88-208ENST00000574087 SPA17Q15506 151 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 TRAM1Q15629 374 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 ACSBG2Q5FVE4 666 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 PPM1LQ5SGD2 360 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 C1orf100Q5SVJ3 147 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 C1orf220Q5T0J3 134 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 SSX6Q7RTT6 188 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 PRSS41Q7RTY9 318 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 PNKDQ8N490 385 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 FAM71E2Q8N5Q1 922 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 ARIH2OSQ8N7S6 290 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 ATP6V1C2Q8NEY4 427 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 OR51S1Q8NGJ8 323 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 OR5H6Q8NGV6 325 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 OR2AE1Q8NHA4 323 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 SDR42E1Q8WUS8 393 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 ASB17Q8WXJ9 295 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 BAALCQ8WXS3 180 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.96□□□□□ -1.94
NUP88-208ENST00000574087 RERGQ96A58 199 aaPredicted RBP2.96□□□□□ -1.94
NUP88-208ENST00000574087 CXorf40BQ96DE9 158 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 ZNF641Q96N77 438 aaPredicted RBP2.96□□□□□ -1.94
NUP88-208ENST00000574087 HIST1H4GQ99525 98 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 NRIP2Q9BQI9 281 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 DEFB129Q9H1M3 183 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 TMEM27Q9HBJ8 222 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 NIT2Q9NQR4 276 aa2.96□□□□□ -1.94
NUP88-208ENST00000574087 SAR1AQ9NR31 198 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms