RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CD177Q8N6Q3 437 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 FAM216BQ8N7L0 139 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 NKAIN3Q8N8D7 197 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 OR5D18Q8NGL1 313 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 TNFAIP8L1Q8WVP5 186 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 TMPRSS13Q9BYE2 586 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 FAM234AQ9H0X4 552 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 SLITRK2Q9H156 845 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 METTL9Q9H1A3 318 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 HMG20AQ9NP66 347 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 MMP26Q9NRE1 261 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 SLC25A10Q9UBX3 287 aaPredicted RBP9.15□□□□□ -0.94
CHD3-216ENST00000573936 OR14J1Q9UGF5 321 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 AUP1Q9Y679 476 aa9.15□□□□□ -0.94
CHD3-216ENST00000573936 TRAV8-7A0A075B6U6 113 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 A0A1W2PPK0 400 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 GABRPO00591 440 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 SH2D1BO14796 132 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 PIN1P1O15428 100 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 ANGPTL7O43827 346 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 ZNF780AO75290 641 aaPredicted RBP9.14□□□□□ -0.95
CHD3-216ENST00000573936 SC5DO75845 299 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 ARL6IP5O75915 188 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 RGS9O75916 674 aaPredicted RBP9.14□□□□□ -0.95
CHD3-216ENST00000573936 MAS1P04201 325 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 PPIAL4GP0DN37 164 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 NDUFB7P17568 137 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 PRKACAP17612 351 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 SRD5A1P18405 259 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 RANBP1P43487 201 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 RPL5P46777 297 aaKnown RBP9.14□□□□□ -0.95
CHD3-216ENST00000573936 NPBWR2P48146 333 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 MTNR1BP49286 362 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 CAPZA1P52907 286 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 PAX8Q06710 450 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 GPR176Q14439 515 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 ZNF146Q15072 292 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 RSU1Q15404 277 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 DGUOKQ16854 277 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 HSD17B12Q53GQ0 312 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 CRIP3Q6Q6R5 217 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 ASCL4Q6XD76 172 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 BATF2Q8N1L9 274 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 TMEM185AQ8NFB2 350 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 OR5D13Q8NGL4 314 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 OR13F1Q8NGS4 319 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 PPP1R35Q8TAP8 253 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 NANPQ8TBE9 248 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 TBC1D15Q8TC07 691 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 TMEM203Q969S6 136 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 FOXRED1Q96CU9 486 aaPredicted RBP9.14□□□□□ -0.95
CHD3-216ENST00000573936 ORAI1Q96D31 301 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 C19orf24Q9BVV8 132 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 FAM192AQ9GZU8 254 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 CNTD2Q9H8S5 307 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 ELL3Q9HB65 397 aaPredicted RBP9.14□□□□□ -0.95
CHD3-216ENST00000573936 RBFOX1Q9NWB1 397 aaKnown RBP9.14□□□□□ -0.95
CHD3-216ENST00000573936 RPUSD1Q9UJJ7 312 aaKnown RBP9.14□□□□□ -0.95
CHD3-216ENST00000573936 ING4Q9UNL4 249 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 SF3B6Q9Y3B4 125 aaKnown RBP9.14□□□□□ -0.95
CHD3-216ENST00000573936 MAB21L2Q9Y586 359 aa9.14□□□□□ -0.95
CHD3-216ENST00000573936 IGKV1-12A0A0C4DH73 117 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 A0A1B0GW55 424 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 C22orf46C9J442 243 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 F8VVB4 439 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 F8VWA3 439 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 CCRL2O00421 344 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 HAND1O96004 215 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 IGKV1D-12P01611 117 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 CSTBP04080 98 aaKnown RBP9.13□□□□□ -0.95
CHD3-216ENST00000573936 UCHL1P09936 223 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 DUX4L2P0CJ85 424 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 DUX4L3P0CJ86 424 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 DUX4L4P0CJ87 422 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 DUX4L5P0CJ88 424 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 DUX4L6P0CJ89 424 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 DUX4L7P0CJ90 424 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 SRMP19623 302 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 GALP22466 123 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 FGF12P61328 243 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 RPS25P62851 125 aaKnown RBP9.13□□□□□ -0.95
CHD3-216ENST00000573936 COL10A1Q03692 680 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 BLMHQ13867 455 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 KRTAP24-1Q3LI83 254 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 GLT8D1Q68CQ7 371 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 ELP2Q6IA86 826 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 DUX4L9Q6RFH8 374 aaPredicted RBP9.13□□□□□ -0.95
CHD3-216ENST00000573936 RNF144BQ7Z419 303 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 C1QL2Q7Z5L3 287 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 JAGN1Q8N5M9 183 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 ZNRF1Q8ND25 227 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 C8orf46Q8TAG6 207 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 H1FXQ92522 213 aaKnown RBP9.13□□□□□ -0.95
CHD3-216ENST00000573936 DACT3Q96B18 629 aaPredicted RBP9.13□□□□□ -0.95
CHD3-216ENST00000573936 YIPF6Q96EC8 236 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 SNX22Q96L94 193 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 UQCC2Q9BRT2 126 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 DCTN5Q9BTE1 182 aa9.13□□□□□ -0.95
CHD3-216ENST00000573936 EXOSC4Q9NPD3 245 aaKnown RBP9.13□□□□□ -0.95
CHD3-216ENST00000573936 NDUFB11Q9NX14 153 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms