RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 GSG1LQ6UXU4 331 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 RFESDQ8TAC1 157 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 GON7Q9BXV9 100 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 OR2S2Q9NQN1 319 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 TMEM272A0A1B0GTI8 110 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 FABP7O15540 132 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 PDCD6O75340 191 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 CLDN14O95500 239 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 GAAP10253 952 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 HES1Q14469 280 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 FCN2Q15485 313 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 SLC9A3R2Q15599 337 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 ZNF79Q15937 498 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 C6orf201Q7Z4U5 140 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 ARL11Q969Q4 196 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 STARD4Q96DR4 205 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 OR2V2Q96R30 315 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 TMEM30CPA0ZSE6 113 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 TRIM64BA6NI03 449 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 HLA-AP01891 365 aaKnown RBP8.75□□□□□ -1.01
SMG6-213ENST00000573166 PTHLHP12272 177 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 HOXD11P31277 338 aaPredicted RBP8.75□□□□□ -1.01
SMG6-213ENST00000573166 PDZK1IP1Q13113 114 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 MUC15Q8N387 334 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 MRPS24Q96EL2 167 aaKnown RBP8.75□□□□□ -1.01
SMG6-213ENST00000573166 FAAP24Q9BTP7 215 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 KCNK15Q9H427 330 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 CA10Q9NS85 328 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 PRELID3BQ9Y3B1 194 aa8.75□□□□□ -1.01
SMG6-213ENST00000573166 CREBBPQ92793 2442 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 CRYZL1O95825 349 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 PDGFAP04085 211 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 GLRXP35754 106 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 BSPH1Q075Z2 132 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 PHLDA2Q53GA4 152 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 OR51S1Q8NGJ8 323 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 ITLN1Q8WWA0 313 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 SPIN2AQ99865 258 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 SPIN2BQ9BPZ2 258 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 RBFOX1Q9NWB1 397 aaKnown RBP8.74□□□□□ -1.01
SMG6-213ENST00000573166 GFOD1Q9NXC2 390 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 CLCF1Q9UBD9 225 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 KIF25Q9UIL4 384 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 LSM2Q9Y333 95 aaKnown RBP8.74□□□□□ -1.01
SMG6-213ENST00000573166 POM121CA8CG34 1229 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 RNF212BA8MTL3 300 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 PTBP1P26599 531 aaKnown RBP eCLIP8.74□□□□□ -1.01
SMG6-213ENST00000573166 KCNMB1Q16558 191 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 FBXW12Q6X9E4 464 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 OR8G5Q8NG78 346 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 OR56B4Q8NH76 319 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 PLSCR4Q9NRQ2 329 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 MBD3L4A6NDZ8 208 aaPredicted RBP8.74□□□□□ -1.01
SMG6-213ENST00000573166 MBD3L3A6NE82 208 aaPredicted RBP8.74□□□□□ -1.01
SMG6-213ENST00000573166 MBD3L5A6NJ08 208 aaPredicted RBP8.74□□□□□ -1.01
SMG6-213ENST00000573166 A8MXE2 369 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 ICMTO60725 284 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 CELA3BP08861 270 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 HOXB5P09067 269 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 OR5H8P0DN80 308 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 CALCRP30988 508 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 CCR6P51684 374 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 CEACAM21Q3KPI0 293 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 PDZD9Q8IXQ8 264 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 OR10X1Q8NGY0 326 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 MBD3L2Q8NHZ7 208 aaPredicted RBP8.74□□□□□ -1.01
SMG6-213ENST00000573166 CHAC2Q8WUX2 184 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 ADGRG7Q96K78 797 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 DOCK10Q96BY6 2186 aa8.74□□□□□ -1.01
SMG6-213ENST00000573166 A0A0G2JNJ9 132 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 LRP5LA4QPB2 252 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 SYNGR3O43761 229 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 LMX1BO60663 402 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 PRAF2O60831 178 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 PET100P0DJ07 73 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 CA7P43166 264 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 GUCA2AQ02747 115 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 OR2AK2Q8NG84 335 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 OR1S1Q8NH92 325 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 STOML3Q8TAV4 291 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 GALMQ96C23 342 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 TSNAXQ99598 290 aaKnown RBP8.73□□□□□ -1.01
SMG6-213ENST00000573166 RSPO3Q9BXY4 272 aaPredicted RBP8.73□□□□□ -1.01
SMG6-213ENST00000573166 AUNIPQ9H7T9 357 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 KLK11Q9UBX7 282 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 Q9UFV3 132 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 TMEM210A6NLX4 147 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 WISP1O95388 367 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 IL18BPO95998 194 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 ALDOBP05062 364 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 HIST1H1DP16402 221 aaKnown RBP8.73□□□□□ -1.01
SMG6-213ENST00000573166 FAM3AP98173 230 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 KRBOX4Q5JUW0 171 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 ZNF808Q8N4W9 903 aaPredicted RBP8.73□□□□□ -1.01
SMG6-213ENST00000573166 OR14K1Q8NGZ2 314 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 OR51H1Q8NH63 302 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 ZNF488Q96MN9 340 aa8.73□□□□□ -1.01
SMG6-213ENST00000573166 SDHCQ99643 169 aaPredicted RBP8.73□□□□□ -1.01
SMG6-213ENST00000573166 ZNF2Q9BSG1 426 aaPredicted RBP8.73□□□□□ -1.01
SMG6-213ENST00000573166 SH2D2AQ9NP31 389 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms