RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 SLC25A28Q96A46 364 aa11.95□□□□□ -0.5
LITAF-208ENST00000571627 CPNE2Q96FN4 548 aaPredicted RBP11.95□□□□□ -0.5
LITAF-208ENST00000571627 CDCA4Q9BXL8 241 aa11.95□□□□□ -0.5
LITAF-208ENST00000571627 C19orf12Q9NSK7 152 aa11.95□□□□□ -0.5
LITAF-208ENST00000571627 A0A0U1RQK1 487 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 RNASEK-C17orf49H0YIS7 233 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 MAGEB3O15480 346 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 RAB3AP20336 220 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 SOX2P48431 317 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 POU3F4P49335 361 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 SLC35A2P78381 396 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 PDZK1IP1Q13113 114 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 YIF1BQ5BJH7 314 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 FIP1L1Q6UN15 594 aaKnown RBP11.94□□□□□ -0.5
LITAF-208ENST00000571627 RNF144BQ7Z419 303 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 PNKDQ8N490 385 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 PIP4P2Q8N4L2 257 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 ZNF561Q8N587 486 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 TMEM106AQ96A25 262 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 RFT1Q96AA3 541 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 CNBD2Q96M20 576 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 SPACA5Q96QH8 159 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 PRDM13Q9H4Q3 707 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 Q9H521 79 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 DUSP21Q9H596 190 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 ZMAT3Q9HA38 289 aaKnown RBP11.94□□□□□ -0.5
LITAF-208ENST00000571627 RHOFQ9HBH0 211 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 IL36RNQ9UBH0 155 aa11.94□□□□□ -0.5
LITAF-208ENST00000571627 CLDN34H7C241 214 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 SPRY1O43609 319 aaPredicted RBP11.93□□□□□ -0.5
LITAF-208ENST00000571627 MELTFP08582 738 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 HCKP08631 526 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 CALCBP10092 127 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 CFPP27918 469 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 COMPP49747 757 aaPredicted RBP11.93□□□□□ -0.5
LITAF-208ENST00000571627 COL10A1Q03692 680 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 ACSM1Q08AH1 577 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 AWAT1Q58HT5 328 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 RBM48Q5RL73 367 aaKnown RBP11.93□□□□□ -0.5
LITAF-208ENST00000571627 ZNF529Q6P280 563 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 Q6YL49 198 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 SAXO1Q8IYX7 474 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 ASCC1Q8N9N2 400 aaKnown RBP11.93□□□□□ -0.5
LITAF-208ENST00000571627 ZSCAN4Q8NAM6 433 aaPredicted RBP11.93□□□□□ -0.5
LITAF-208ENST00000571627 OR4M1Q8NGD0 313 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 THRSPQ92748 146 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 PGLYRP3Q96LB9 341 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 ZNF184Q99676 751 aaPredicted RBP11.93□□□□□ -0.5
LITAF-208ENST00000571627 SEBOXQ9HB31 216 aaPredicted RBP11.93□□□□□ -0.5
LITAF-208ENST00000571627 RBFOX1Q9NWB1 397 aaKnown RBP11.93□□□□□ -0.5
LITAF-208ENST00000571627 BLOC1S6Q9UL45 172 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 NBEAL1Q6ZS30 2694 aa11.93□□□□□ -0.5
LITAF-208ENST00000571627 TRBV23-1A0A0A0MS06 115 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 TRBV5-5A0A0J9YX44 114 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 MEX3AA1L020 520 aaKnown RBP11.92□□□□□ -0.5
LITAF-208ENST00000571627 M0R1W7 72 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 RGS10O43665 173 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 HKR1P10072 659 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 CELP19835 753 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 BCL3P20749 454 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 CRHBPP24387 322 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 NPBWR2P48146 333 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 SNU13P55769 128 aaKnown RBP11.92□□□□□ -0.5
LITAF-208ENST00000571627 RPL31P62899 125 aaKnown RBP11.92□□□□□ -0.5
LITAF-208ENST00000571627 PPP3R1P63098 170 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 SPHARQ15513 63 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 KISS1Q15726 138 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 Q499Y3 187 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 METAP1DQ6UB28 335 aaPredicted RBP11.92□□□□□ -0.5
LITAF-208ENST00000571627 C3orf56Q8N813 242 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 ZFP41Q8N8Y5 198 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 OR5D18Q8NGL1 313 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 TNFRSF14Q92956 283 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 EMG1Q92979 244 aaKnown RBP11.92□□□□□ -0.5
LITAF-208ENST00000571627 CHIAQ9BZP6 476 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 NOX4Q9NPH5 578 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 PAK1IP1Q9NWT1 392 aaPredicted RBP11.92□□□□□ -0.5
LITAF-208ENST00000571627 CKLFQ9UBR5 152 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 GLS2Q9UI32 602 aa11.92□□□□□ -0.5
LITAF-208ENST00000571627 ANGPTL7O43827 346 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 IGHV4-59P01825 116 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 TK1P04183 234 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 ALDOBP05062 364 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 CHRM2P08172 466 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 CCL3L1P16619 93 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 DUSP1P28562 367 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 BLMHQ13867 455 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 ZNF273Q14593 569 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 IRF3Q14653 427 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 TMEM200BQ69YZ2 307 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 PRSS48Q7RTY5 328 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 FAM58AQ8N1B3 248 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 FAM234AQ9H0X4 552 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 METTL8Q9H825 291 aaKnown RBP11.91□□□□□ -0.5
LITAF-208ENST00000571627 TMEM138Q9NPI0 162 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 TAS2R4Q9NYW5 299 aa11.91□□□□□ -0.5
LITAF-208ENST00000571627 IGKV1-12A0A0C4DH73 117 aa11.9□□□□□ -0.5
LITAF-208ENST00000571627 PNMA8CA0A1B0GUJ8 204 aa11.9□□□□□ -0.5
LITAF-208ENST00000571627 FAM181BA6NEQ2 426 aa11.9□□□□□ -0.5
LITAF-208ENST00000571627 K7N7A8 449 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms