RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 SPATS1Q496A3 300 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 MINOS1Q5TGZ0 78 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 LCN1P1Q5VSP4 162 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 DEGS2Q6QHC5 323 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 EGFL6Q8IUX8 553 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 MRPL41Q8IXM3 137 aaKnown RBP9.6□□□□□ -0.87
CAPN3-220ENST00000569827 CANT1Q8WVQ1 401 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 STMN2Q93045 179 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 SNX22Q96L94 193 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 LRGUKQ96M69 825 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 PKIBQ9C010 78 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 PLEKHA1Q9HB21 404 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 ZNF286AQ9HBT8 521 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 ADGRL4Q9HBW9 690 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 SLC25A19Q9HC21 320 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 MED4Q9NPJ6 270 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 MRM2Q9UI43 246 aaKnown RBP9.6□□□□□ -0.87
CAPN3-220ENST00000569827 LINC00527Q9UJ94 153 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 LINC00312Q9Y6C7 94 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 MINOS1-NBL1R4GNA1 71 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 SORL1Q92673 2214 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 RYR2Q92736 4967 aa9.59□□□□□ -0.87
CAPN3-220ENST00000569827 ZNF254O75437 659 aa9.59□□□□□ -0.87
CAPN3-220ENST00000569827 OR3A1P47881 315 aa9.59□□□□□ -0.87
CAPN3-220ENST00000569827 ZNF91Q05481 1191 aa9.59□□□□□ -0.87
CAPN3-220ENST00000569827 RBM39Q14498 530 aaKnown RBP9.59□□□□□ -0.87
CAPN3-220ENST00000569827 C8orf86Q6ZUL3 223 aa9.59□□□□□ -0.87
CAPN3-220ENST00000569827 RNF144BQ7Z419 303 aa9.59□□□□□ -0.87
CAPN3-220ENST00000569827 ABHD12Q8N2K0 398 aa9.59□□□□□ -0.87
CAPN3-220ENST00000569827 CAPSLQ8WWF8 208 aa9.59□□□□□ -0.87
CAPN3-220ENST00000569827 ASB17Q8WXJ9 295 aa9.59□□□□□ -0.87
CAPN3-220ENST00000569827 RFT1Q96AA3 541 aa9.59□□□□□ -0.87
CAPN3-220ENST00000569827 NOL4LQ96MY1 436 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-220ENST00000569827 B9D2Q9BPU9 175 aa9.59□□□□□ -0.87
CAPN3-220ENST00000569827 ZNF556Q9HAH1 456 aa9.59□□□□□ -0.87
CAPN3-220ENST00000569827 LIN7BQ9HAP6 207 aa9.59□□□□□ -0.87
CAPN3-220ENST00000569827 ARL2BPQ9Y2Y0 163 aa9.59□□□□□ -0.87
CAPN3-220ENST00000569827 E9PQ18 207 aa9.58□□□□□ -0.88
CAPN3-220ENST00000569827 IGHV3-7P01780 117 aa9.58□□□□□ -0.88
CAPN3-220ENST00000569827 PRKACAP17612 351 aa9.58□□□□□ -0.88
CAPN3-220ENST00000569827 CDK2P24941 298 aa9.58□□□□□ -0.88
CAPN3-220ENST00000569827 PEX2P28328 305 aa9.58□□□□□ -0.88
CAPN3-220ENST00000569827 EPHA2P29317 976 aa9.58□□□□□ -0.88
CAPN3-220ENST00000569827 GNGT1P63211 74 aa9.58□□□□□ -0.88
CAPN3-220ENST00000569827 MEF2CQ06413 473 aaPredicted RBP9.58□□□□□ -0.88
CAPN3-220ENST00000569827 YIPF7Q8N8F6 280 aa9.58□□□□□ -0.88
CAPN3-220ENST00000569827 TFAP2CQ92754 450 aa9.58□□□□□ -0.88
CAPN3-220ENST00000569827 RBM14Q96PK6 669 aaKnown RBP9.58□□□□□ -0.88
CAPN3-220ENST00000569827 MOB1AQ9H8S9 216 aa9.58□□□□□ -0.88
CAPN3-220ENST00000569827 DPM3Q9P2X0 92 aa9.58□□□□□ -0.88
CAPN3-220ENST00000569827 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.58□□□□□ -0.88
CAPN3-220ENST00000569827 SLC7A11Q9UPY5 501 aa9.58□□□□□ -0.88
CAPN3-220ENST00000569827 SNX5Q9Y5X3 404 aa9.58□□□□□ -0.88
CAPN3-220ENST00000569827 TENM2Q9NT68 2774 aa9.58□□□□□ -0.88
CAPN3-220ENST00000569827 PSMB11A5LHX3 300 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 NUDT19A8MXV4 375 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 SYT7O43581 403 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 MITFO75030 526 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-220ENST00000569827 ENTPD6O75354 484 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 DCTN3O75935 186 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 OR2F2O95006 317 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 CLIC3O95833 236 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 SNRNP70P08621 437 aaKnown RBP9.57□□□□□ -0.88
CAPN3-220ENST00000569827 CCL1P22362 96 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 OR3A4PP47883 348 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 GLIPR1P48060 266 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 CRISP1P54107 249 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 AESQ08117 197 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 IL18R1Q13478 541 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 MEPCEQ7L2J0 689 aaKnown RBP9.57□□□□□ -0.88
CAPN3-220ENST00000569827 C16orf82Q7Z2V1 217 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 PIGWQ7Z7B1 504 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 CATSPERDQ86XM0 798 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 RDH10Q8IZV5 341 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 TCEANCQ8N8B7 351 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 DPF1Q92782 380 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 BORCS8Q96FH0 119 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 AKR1E2Q96JD6 320 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 IL4I1Q96RQ9 567 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 DNAJB9Q9UBS3 223 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 TMEM14AQ9Y6G1 99 aa9.57□□□□□ -0.88
CAPN3-220ENST00000569827 ZNF670-ZNF695F2Z2N8 137 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 DUS4LO95620 317 aaKnown RBP9.56□□□□□ -0.88
CAPN3-220ENST00000569827 IGLV1-47P01700 117 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 BRS3P32247 399 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 THBS3P49746 956 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 DAPP51397 102 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 LUMP51884 338 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-220ENST00000569827 P2RX3P56373 397 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 RAB25P57735 213 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 RPL23AP62750 156 aaKnown RBP9.56□□□□□ -0.88
CAPN3-220ENST00000569827 SCN1BQ07699 218 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 DIAPH2-AS1Q14236 149 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 PTGES3Q15185 160 aaKnown RBP9.56□□□□□ -0.88
CAPN3-220ENST00000569827 DEFB136Q30KP8 78 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 TPTE2P1Q5T6R2 138 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 SLX4IPQ5VYV7 408 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 Q6ZSR3 168 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 LCNL1Q6ZST4 164 aa9.56□□□□□ -0.88
CAPN3-220ENST00000569827 FAM58AQ8N1B3 248 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms