RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 WNT2P09544 360 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 ZNF35P13682 527 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 SYPL1Q16563 259 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 LDLRAD2Q5SZI1 272 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 DCST2Q5T1A1 773 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 LCN8Q6JVE9 175 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 IL17RELQ6ZVW7 336 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 OR4N4Q8N0Y3 316 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 C9orf62Q8N4C0 152 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 GATSQ8NAP1 163 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 ACOT12Q8WYK0 555 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 SEH1LQ96EE3 360 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 PIK3IP1Q96FE7 263 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 GMPPAQ96IJ6 420 aaPredicted RBP5.79□□□□□ -1.48
SMG1-217ENST00000569764 ADOQ96SZ5 270 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 SEPHS2Q99611 448 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 HCAR1Q9BXC0 346 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 LSM5Q9Y4Y9 91 aaKnown RBP5.79□□□□□ -1.48
SMG1-217ENST00000569764 PLPP2O43688 288 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 GCM2O75603 506 aaPredicted RBP5.79□□□□□ -1.48
SMG1-217ENST00000569764 C1QBP02746 253 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 SLC25A16P16260 332 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 ZNF823P16415 610 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 SELEP16581 610 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 CRISP1P54107 249 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 EGR4Q05215 589 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 PPP1R1AQ13522 171 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 C3AR1Q16581 482 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 CMTM4Q8IZR5 234 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 RDH10Q8IZV5 341 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 LGI3Q8N145 548 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 LINC00052Q96N35 136 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 OR52E6Q96RD3 313 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 ATP5SQ99766 215 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 VNN3Q9NY84 501 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 ICAM5Q9UMF0 924 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 FAM96BQ9Y3D0 163 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 LRP5LA4QPB2 252 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 HPGDSO60760 199 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 PRB1P04280 392 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 HTR5AP47898 357 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 RPL15P61313 204 aaKnown RBP5.79□□□□□ -1.48
SMG1-217ENST00000569764 PAFAH1B2P68402 229 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 FABP9Q0Z7S8 132 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 SRSF7Q16629 238 aaKnown RBP eCLIP5.79□□□□□ -1.48
SMG1-217ENST00000569764 SLC36A2Q495M3 483 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 NIPAL3Q6P499 406 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 C8orf59Q8N0T1 100 aaPredicted RBP5.79□□□□□ -1.48
SMG1-217ENST00000569764 RELL2Q8NC24 303 aaPredicted RBP5.79□□□□□ -1.48
SMG1-217ENST00000569764 ZNF738Q8NE65 137 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 OR2A5Q96R48 311 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 METTL17Q9H7H0 456 aaPredicted RBP5.79□□□□□ -1.48
SMG1-217ENST00000569764 FBXL2Q9UKC9 423 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 IGLV3-12A0A075B6K2 115 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 A0A1W2PS29 197 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 NPIPB5A8MRT5 1133 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 TMPRSS2O15393 492 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 RENP00797 406 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 GGT1P19440 569 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 PRPH2P23942 346 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 PTGER1P34995 402 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 PLP1P60201 277 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 S100A10P60903 97 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 ZNF181Q2M3W8 571 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 FAM71F2Q6NXP2 309 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 ZNF620Q6ZNG0 422 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 TSEN54Q7Z6J9 526 aaKnown RBP5.78□□□□□ -1.48
SMG1-217ENST00000569764 LINC00471Q8N535 108 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 NOXO1Q8NFA2 376 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 OR1K1Q8NGR3 316 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 NPIPB3Q92617 1050 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 ZC3HAV1LQ96H79 300 aaKnown RBP5.78□□□□□ -1.48
SMG1-217ENST00000569764 ZNF649Q9BS31 505 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 NIPAL2Q9H841 368 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 OAZ3Q9UMX2 235 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 A0A087X0K7 114 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 H0YL77 283 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 SLC1A7O00341 560 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 EPPINO95925 133 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 FGF7P21781 194 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 ANOS1P23352 680 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 LIM2P55344 173 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 BIDP55957 195 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 RAP1AP62834 184 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 GLYATQ6IB77 296 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 CALHM3Q86XJ0 350 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 MARCH9Q86YJ5 346 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 ASIC5Q9NY37 505 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 PIPOXQ9P0Z9 390 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 B3GALT5Q9Y2C3 310 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 SF3B6Q9Y3B4 125 aaKnown RBP5.78□□□□□ -1.48
SMG1-217ENST00000569764 INTS1Q8N201 2190 aaKnown RBP5.78□□□□□ -1.48
SMG1-217ENST00000569764 DHRS12A0PJE2 317 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 GGCTO75223 188 aaKnown RBP5.78□□□□□ -1.48
SMG1-217ENST00000569764 C6orf47O95873 294 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 TRAPPC2P0DI81 140 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 TRAPPC2BP0DI82 140 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 PEBP1P30086 187 aaKnown RBP5.78□□□□□ -1.48
SMG1-217ENST00000569764 MVDP53602 400 aa5.78□□□□□ -1.48
SMG1-217ENST00000569764 OR2B8PP59922 312 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms