RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 TMEM82A0PJX8 343 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 IRGMA1A4Y4 181 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 SPRY1O43609 319 aaPredicted RBP16.55■□□□□ 0.24
CLK3-225ENST00000569063 ANGPTL7O43827 346 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 GPR137BO60478 399 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 HAND1O96004 215 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 PAHP00439 452 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 PEX2P28328 305 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 RAG2P55895 527 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 DLX6P56179 175 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 ADARB1P78563 741 aaKnown RBP16.55■□□□□ 0.24
CLK3-225ENST00000569063 TAF9Q16594 264 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 CCDC58Q4VC31 144 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 CRIP3Q6Q6R5 217 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 C17orf107Q6ZR85 190 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 GDPD3Q7L5L3 318 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 BEND2Q8NDZ0 799 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 CYGBQ8WWM9 190 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 SLITRK2Q9H156 845 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 RHOFQ9HBH0 211 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 BEX1Q9HBH7 125 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 NEK6Q9HC98 313 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 IL36RNQ9UBH0 155 aa16.55■□□□□ 0.24
CLK3-225ENST00000569063 IGKV1-12A0A0C4DH73 117 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 C17orf98A8MV24 154 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 KDM4BO94953 1096 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 IGKV1D-12P01611 117 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 RBP4P02753 201 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 ETV1P50549 477 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 GTF2A1P52655 376 aaPredicted RBP16.54■□□□□ 0.24
CLK3-225ENST00000569063 ERVFRD-1P60508 538 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 MEF2CQ06413 473 aaPredicted RBP16.54■□□□□ 0.24
CLK3-225ENST00000569063 IL18R1Q13478 541 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 GDPGP1Q6ZNW5 385 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 RNF144BQ7Z419 303 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 SAXO1Q8IYX7 474 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 DHRSXQ8N5I4 330 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 SETD9Q8NE22 299 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 RFT1Q96AA3 541 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 AJUBAQ96IF1 538 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 SPACA5Q96QH8 159 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 HMG20AQ9NP66 347 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 GLS2Q9UI32 602 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 DIMT1Q9UNQ2 313 aaKnown RBP16.54■□□□□ 0.24
CLK3-225ENST00000569063 DHDHQ9UQ10 334 aa16.54■□□□□ 0.24
CLK3-225ENST00000569063 BTBD17A6NE02 478 aa16.53■□□□□ 0.24
CLK3-225ENST00000569063 SULT1B1O43704 296 aa16.53■□□□□ 0.24
CLK3-225ENST00000569063 PSPNO60542 156 aa16.53■□□□□ 0.24
CLK3-225ENST00000569063 PIPP12273 146 aaPredicted RBP16.53■□□□□ 0.24
CLK3-225ENST00000569063 PRKACAP17612 351 aa16.53■□□□□ 0.24
CLK3-225ENST00000569063 EDDM3BP56851 147 aa16.53■□□□□ 0.24
CLK3-225ENST00000569063 RPL22L1Q6P5R6 122 aaKnown RBP16.53■□□□□ 0.24
CLK3-225ENST00000569063 TMPRSS11AQ6ZMR5 421 aa16.53■□□□□ 0.24
CLK3-225ENST00000569063 OR52N4Q8NGI2 321 aa16.53■□□□□ 0.24
CLK3-225ENST00000569063 OR5R1Q8NH85 324 aa16.53■□□□□ 0.24
CLK3-225ENST00000569063 RPS4Y2Q8TD47 263 aa16.53■□□□□ 0.24
CLK3-225ENST00000569063 C17orf50Q8WW18 174 aa16.53■□□□□ 0.24
CLK3-225ENST00000569063 MEGF9Q9H1U4 602 aa16.53■□□□□ 0.24
CLK3-225ENST00000569063 VPREB3Q9UKI3 123 aa16.53■□□□□ 0.24
CLK3-225ENST00000569063 ZNF728P0DKX0 622 aa16.52■□□□□ 0.24
CLK3-225ENST00000569063 CALCBP10092 127 aa16.52■□□□□ 0.24
CLK3-225ENST00000569063 DUSP1P28562 367 aa16.52■□□□□ 0.24
CLK3-225ENST00000569063 KISS1Q15726 138 aa16.52■□□□□ 0.24
CLK3-225ENST00000569063 OGFRL1Q5TC84 451 aaPredicted RBP16.52■□□□□ 0.24
CLK3-225ENST00000569063 XAF1Q6GPH4 301 aa16.52■□□□□ 0.24
CLK3-225ENST00000569063 ZNF529Q6P280 563 aa16.52■□□□□ 0.24
CLK3-225ENST00000569063 ZSCAN4Q8NAM6 433 aaPredicted RBP16.52■□□□□ 0.24
CLK3-225ENST00000569063 TSEN15Q8WW01 171 aaKnown RBP16.52■□□□□ 0.24
CLK3-225ENST00000569063 HSPE1-MOB4S4R3N1 261 aa16.52■□□□□ 0.24
CLK3-225ENST00000569063 hADV38S2A0JD32 116 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 CLPSL1A2RUU4 121 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 SH2D1BO14796 132 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 CASQ2O14958 399 aaPredicted RBP16.51■□□□□ 0.23
CLK3-225ENST00000569063 HCKP08631 526 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 MYL12AP19105 171 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 GABRR1P24046 479 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 LMO1P25800 156 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 ZP1P60852 638 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 CDK5R1Q15078 307 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 GRK1Q15835 563 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 OR2G6Q5TZ20 316 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 OLFML2AQ68BL7 652 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 TCF23Q7RTU1 214 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 OR5D18Q8NGL1 313 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 RGP1Q92546 391 aaPredicted RBP16.51■□□□□ 0.23
CLK3-225ENST00000569063 CHST6Q9GZX3 395 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 BABAM2Q9NXR7 383 aa16.51■□□□□ 0.23
CLK3-225ENST00000569063 EXOSC1Q9Y3B2 195 aaKnown RBP16.51■□□□□ 0.23
CLK3-225ENST00000569063 MGST3O14880 152 aa16.5■□□□□ 0.23
CLK3-225ENST00000569063 OGG1O15527 345 aa16.5■□□□□ 0.23
CLK3-225ENST00000569063 CAPGP40121 348 aa16.5■□□□□ 0.23
CLK3-225ENST00000569063 EDDM3AQ14507 147 aa16.5■□□□□ 0.23
CLK3-225ENST00000569063 AANATQ16613 207 aa16.5■□□□□ 0.23
CLK3-225ENST00000569063 PRR31Q5SQ13 230 aa16.5■□□□□ 0.23
CLK3-225ENST00000569063 OR4S1Q8NGB4 309 aa16.5■□□□□ 0.23
CLK3-225ENST00000569063 PPP1R35Q8TAP8 253 aa16.5■□□□□ 0.23
CLK3-225ENST00000569063 GPR148Q8TDV2 347 aa16.5■□□□□ 0.23
CLK3-225ENST00000569063 WFDC12Q8WWY7 111 aa16.5■□□□□ 0.23
CLK3-225ENST00000569063 TMEM80Q96HE8 168 aa16.5■□□□□ 0.23
CLK3-225ENST00000569063 ZNF714Q96N38 554 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms