RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 LINC00470Q9BZP3 86 aa15.33■□□□□ 0.05
CMTM3-214ENST00000567572 CARHSP1Q9Y2V2 147 aaKnown RBP15.33■□□□□ 0.05
CMTM3-214ENST00000567572 FAM90A10PA6NDY2 464 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 FAM90A18PA6NE21 464 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 FAM90A16PA6NEW6 464 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 FAM90A20PA6NIJ5 464 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 FAM90A8PA6NJQ4 464 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 FAM90A7PA6NKC0 464 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 FAM90A22PA8MWA6 464 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 FAM90A12PA8MX19 464 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 FAM90A5PA8MXJ8 464 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 FAM90A23PA8MXZ1 464 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 PRSS44E7EML9 344 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 DNASE2O00115 360 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-214ENST00000567572 ABCD4O14678 606 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 HOXB5P09067 269 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 FAM90A15PP0C7V4 464 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 FAM90A13PP0C7W8 464 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 FAM90A14PP0C7W9 464 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 FAM90A24PP0C7X0 464 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 CTRB1P17538 263 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 FAM3AP98173 230 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 DEFA5Q01523 94 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 TAF9Q16594 264 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 CTRB2Q6GPI1 263 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 TMEM200AQ86VY9 491 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 TMED6Q8WW62 240 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 NARS2Q96I59 477 aaKnown RBP15.33■□□□□ 0.04
CMTM3-214ENST00000567572 C1QTNF5Q9BXJ0 243 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 PLEKHA2Q9HB19 425 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 ACKR4Q9NPB9 350 aa15.33■□□□□ 0.04
CMTM3-214ENST00000567572 DEDDO75618 318 aa15.32■□□□□ 0.04
CMTM3-214ENST00000567572 CST4P01036 141 aa15.32■□□□□ 0.04
CMTM3-214ENST00000567572 ZNF728P0DKX0 622 aa15.32■□□□□ 0.04
CMTM3-214ENST00000567572 S100A10P60903 97 aa15.32■□□□□ 0.04
CMTM3-214ENST00000567572 SRYQ05066 204 aa15.32■□□□□ 0.04
CMTM3-214ENST00000567572 PDZK1IP1Q13113 114 aa15.32■□□□□ 0.04
CMTM3-214ENST00000567572 ZNF766Q5HY98 468 aa15.32■□□□□ 0.04
CMTM3-214ENST00000567572 DMRTC1Q5HYR2 192 aa15.32■□□□□ 0.04
CMTM3-214ENST00000567572 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.32■□□□□ 0.04
CMTM3-214ENST00000567572 Q8NFD4 153 aa15.32■□□□□ 0.04
CMTM3-214ENST00000567572 OR51F2Q8NH61 342 aa15.32■□□□□ 0.04
CMTM3-214ENST00000567572 FAAP24Q9BTP7 215 aa15.32■□□□□ 0.04
CMTM3-214ENST00000567572 NAA60Q9H7X0 242 aa15.32■□□□□ 0.04
CMTM3-214ENST00000567572 ZNF286AQ9HBT8 521 aa15.32■□□□□ 0.04
CMTM3-214ENST00000567572 MUC6Q6W4X9 2439 aa15.32■□□□□ 0.04
CMTM3-214ENST00000567572 TOR1AO14656 332 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 SPRY1O43609 319 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-214ENST00000567572 ANGPTL7O43827 346 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 PDCD6O75340 191 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 JTBO76095 146 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 SFTPBP07988 381 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 MMP7P09237 267 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-214ENST00000567572 HKR1P10072 659 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 TNFSF10P50591 281 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 PJVKQ0ZLH3 352 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 TMEM211Q6ICI0 200 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 CLRN3Q8NCR9 226 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 AKR7LQ8NHP1 331 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 CYYR1Q96J86 154 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 DLL3Q9NYJ7 618 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 ZNF629Q9UEG4 869 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-214ENST00000567572 CELSR3Q9NYQ7 3312 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 ZNF850A8MQ14 1090 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 K7EPK0 472 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 MSTNO14793 375 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 SRSF7Q16629 238 aaKnown RBP eCLIP15.31■□□□□ 0.04
CMTM3-214ENST00000567572 ATRAIDQ6UW56 229 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 COLCA1Q6ZS62 124 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 SPAG16Q8N0X2 631 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 FAM71E2Q8N5Q1 922 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 TMEM178AQ8NBL3 297 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 OR10AD1Q8NGE0 317 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 TSNAXQ99598 290 aaKnown RBP15.31■□□□□ 0.04
CMTM3-214ENST00000567572 SYT3Q9BQG1 590 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 SULT4A1Q9BR01 284 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 HDHD3Q9BSH5 251 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-214ENST00000567572 PRR13Q9NZ81 148 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 GSKIPQ9P0R6 139 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 POMT1Q9Y6A1 747 aa15.31■□□□□ 0.04
CMTM3-214ENST00000567572 KCNAB3O43448 404 aa15.3■□□□□ 0.04
CMTM3-214ENST00000567572 ACTL6AO96019 429 aa15.3■□□□□ 0.04
CMTM3-214ENST00000567572 COX5BP10606 129 aa15.3■□□□□ 0.04
CMTM3-214ENST00000567572 RPL12P30050 165 aaKnown RBP15.3■□□□□ 0.04
CMTM3-214ENST00000567572 BLOC1S1P78537 153 aa15.3■□□□□ 0.04
CMTM3-214ENST00000567572 MALLQ13021 153 aa15.3■□□□□ 0.04
CMTM3-214ENST00000567572 ZNF169Q14929 603 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-214ENST00000567572 SLC10A1Q14973 349 aa15.3■□□□□ 0.04
CMTM3-214ENST00000567572 RTP5Q14D33 572 aa15.3■□□□□ 0.04
CMTM3-214ENST00000567572 ABCA11PQ4W5N1 156 aa15.3■□□□□ 0.04
CMTM3-214ENST00000567572 GGNBP1Q5YKI7 109 aa15.3■□□□□ 0.04
CMTM3-214ENST00000567572 Q6ZS49 121 aa15.3■□□□□ 0.04
CMTM3-214ENST00000567572 AIFM2Q9BRQ8 373 aa15.3■□□□□ 0.04
CMTM3-214ENST00000567572 TAF9BQ9HBM6 251 aa15.3■□□□□ 0.04
CMTM3-214ENST00000567572 PARPBPQ9NWS1 579 aa15.3■□□□□ 0.04
CMTM3-214ENST00000567572 PURGQ9UJV8 347 aaKnown RBP15.3■□□□□ 0.04
CMTM3-214ENST00000567572 LIPGQ9Y5X9 500 aa15.3■□□□□ 0.04
CMTM3-214ENST00000567572 ZNF705EA8MWA4 302 aaPredicted RBP15.29■□□□□ 0.04
CMTM3-214ENST00000567572 SYNGR4O95473 234 aa15.29■□□□□ 0.04
CMTM3-214ENST00000567572 GLP1RP43220 463 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms