RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 CCNYL1Q8N7R7 359 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 ITFG1Q8TB96 612 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 CA5BP1Q8WTZ4 195 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 PYURFQ96I23 114 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 ADTRPQ96IZ2 230 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 TPD52L3Q96J77 140 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 ZNF436Q9C0F3 470 aaPredicted RBP0.23□□□□□ -2.37
CDH1-211ENST00000567320 NAA50Q9GZZ1 169 aaKnown RBP0.23□□□□□ -2.37
CDH1-211ENST00000567320 TMEM185BQ9H7F4 350 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 ADA2Q9NZK5 511 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 COX16Q9P0S2 106 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 SLC23A2Q9UGH3 650 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 SLIT2O94813 1529 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 PLEKHG2Q9H7P9 1386 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 NUP205Q92621 2012 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 A0A075B6Q4 140 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 LOC389332A0A1B0GUA5 103 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 LOC102725191A0A1B0GVB3 256 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 A0A1W2PRG6 482 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 LECT2O14960 151 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 COX7A2P2O60397 106 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 GPR75O95800 540 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 MAGEA12P43365 314 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 RPL18AQ02543 176 aaKnown RBP0.22□□□□□ -2.37
CDH1-211ENST00000567320 TTC32Q5I0X7 151 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 UBE2NLQ5JXB2 153 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 ARMC12Q5T9G4 340 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 TMEM220Q6QAJ8 160 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 SCD5Q86SK9 330 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 RBM45Q8IUH3 476 aaKnown RBP0.22□□□□□ -2.37
CDH1-211ENST00000567320 BBS5Q8N3I7 341 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 OR10P1Q8NGE3 313 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 TMEM234Q8WY98 164 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 C22orf15Q8WYQ4 148 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 HIST1H2BAQ96A08 127 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 TMED9Q9BVK6 235 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 PRSS16Q9NQE7 514 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 GCNT4Q9P109 453 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 MINOS1-NBL1R4GNA1 71 aa0.22□□□□□ -2.37
CDH1-211ENST00000567320 OTOFQ9HC10 1997 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 KCNE1BA0A087WTH5 132 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 VPS37CA5D8V6 355 aaPredicted RBP0.21□□□□□ -2.38
CDH1-211ENST00000567320 HACD1B0YJ81 288 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 PLPP3O14495 311 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 TRDMT1O14717 391 aaKnown RBP0.21□□□□□ -2.38
CDH1-211ENST00000567320 RNF113AO15541 343 aaKnown RBP0.21□□□□□ -2.38
CDH1-211ENST00000567320 GCGP01275 180 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 GUSBP08236 651 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 UBCP0CG48 685 aaKnown RBP0.21□□□□□ -2.38
CDH1-211ENST00000567320 GFAPP14136 432 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 CD9P21926 228 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 CRABP1P29762 137 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 ATP6V0D1P61421 351 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 KRTAP21-1Q3LI58 79 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 ZNF404Q494X3 552 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 CLLU1OSQ5K130 101 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 C10orf91Q5T1B1 145 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 CARD17Q5XLA6 110 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 MARCH3Q86UD3 253 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 OR4C5Q8NGB2 326 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 OR4A5Q8NH83 315 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 UBA3Q8TBC4 463 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 PEX13Q92968 403 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 YPEL4Q96NS1 127 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 METTL26Q96S19 204 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 GPR22Q99680 433 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 ULBP1Q9BZM6 244 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 ARL6Q9H0F7 186 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 NT5C3AQ9H0P0 336 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 TDRD3Q9H7E2 651 aaKnown RBP0.21□□□□□ -2.38
CDH1-211ENST00000567320 GEMIN7Q9H840 131 aaKnown RBP0.21□□□□□ -2.38
CDH1-211ENST00000567320 KLF12Q9Y4X4 402 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 PTPRKQ15262 1439 aa0.21□□□□□ -2.38
CDH1-211ENST00000567320 MUC21A0A0G2JKD1 596 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 MUC21A0A140T8X8 626 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 OR5H14A6NHG9 310 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 SLC22A20A6NK97 555 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 DFFAO00273 331 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 SLC37A4O43826 429 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 GPR1P46091 355 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 C5orf64Q2M2E5 130 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 CDNFQ49AH0 187 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 C16orf87Q6PH81 154 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 EIF3MQ7L2H7 374 aaKnown RBP0.2□□□□□ -2.38
CDH1-211ENST00000567320 TAS2R42Q7RTR8 314 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 VN1R4Q7Z5H5 301 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 OR2M3Q8NG83 312 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 OR11G2Q8NGC1 345 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 OR4X1Q8NH49 305 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 CAPZA3Q96KX2 299 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 ANAPC13Q9BS18 74 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 FAM192AQ9GZU8 254 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 KCNIP2Q9NS61 270 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 C20orf96Q9NUD7 363 aaPredicted RBP0.2□□□□□ -2.38
CDH1-211ENST00000567320 PSORS1C2Q9UIG4 136 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 SOX21Q9Y651 276 aaPredicted RBP0.2□□□□□ -2.38
CDH1-211ENST00000567320 LCTP09848 1927 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 RTEL1-TNFRSF6BF6WH68 1400 aa0.2□□□□□ -2.38
CDH1-211ENST00000567320 IGHV2OR16-5A0A0B4J2B6 119 aa0.19□□□□□ -2.38
CDH1-211ENST00000567320 SIVA1O15304 175 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms