RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 MND1Q9BWT6 205 aa10.6□□□□□ -0.71
CNEP1R1-208ENST00000566482 CDCA4Q9BXL8 241 aa10.6□□□□□ -0.71
CNEP1R1-208ENST00000566482 HMG20AQ9NP66 347 aa10.6□□□□□ -0.71
CNEP1R1-208ENST00000566482 ESM1Q9NQ30 184 aa10.6□□□□□ -0.71
CNEP1R1-208ENST00000566482 C19orf12Q9NSK7 152 aa10.6□□□□□ -0.71
CNEP1R1-208ENST00000566482 IGHV1-69DA0A0B4J2H0 117 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 K7N7A8 449 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 M0R1W7 72 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 MAGEB3O15480 346 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 ZNF737O75373 536 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 KDM4BO94953 1096 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 IGHV1-69P01742 117 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 CELP19835 753 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 DUSP1P28562 367 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 VHLP40337 213 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 DLX1P56177 255 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 BPIFB3P59826 476 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 RPL31P62899 125 aaKnown RBP10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 PPP3R1P63098 170 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 PRB3Q04118 309 aaPredicted RBP10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 Q499Y3 187 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 YIF1BQ5BJH7 314 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 RBMS3Q6XE24 437 aaKnown RBP10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 SATL1Q86VE3 508 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 PDZD9Q8IXQ8 264 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 ZDHHC22Q8N966 263 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 ZSCAN4Q8NAM6 433 aaPredicted RBP10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 OR4M1Q8NGD0 313 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 OR52N4Q8NGI2 321 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 CNBD2Q96M20 576 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 JMJD8Q96S16 334 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 FAM234AQ9H0X4 552 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 SEBOXQ9HB31 216 aaPredicted RBP10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 SIRT7Q9NRC8 400 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 LSM2Q9Y333 95 aaKnown RBP10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 TPRKBQ9Y3C4 175 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 PCDHGB5Q9Y5G0 923 aa10.59□□□□□ -0.71
CNEP1R1-208ENST00000566482 TRBV5-7A0A0A0MS05 114 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 MDFIC2A0A1B0GVS7 189 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 TMEM82A0PJX8 343 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 GABRPO00591 440 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 ALDOBP05062 364 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 CD1AP06126 327 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 IGFBP3P17936 291 aaPredicted RBP10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 CRHBPP24387 322 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 BDH1Q02338 343 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 KLRD1Q13241 179 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 IRF3Q14653 427 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 ZNF146Q15072 292 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 DEFB112Q30KQ8 113 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 SPIN3Q5JUX0 258 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 C17orf107Q6ZR85 190 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 CPNE2Q96FN4 548 aaPredicted RBP10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 SNX22Q96L94 193 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 OR14A2Q96R54 314 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 OR5M11Q96RB7 305 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 GPER1Q99527 375 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 NKX3-1Q99801 234 aaPredicted RBP10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 DUSP21Q9H596 190 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 RHOFQ9HBH0 211 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 TMEM138Q9NPI0 162 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 RAB26Q9ULW5 256 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 GSTK1Q9Y2Q3 226 aa10.58□□□□□ -0.72
CNEP1R1-208ENST00000566482 TRAV8-7A0A075B6U6 113 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 DNAJC9-AS1A6NH13 148 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 RNASEK-C17orf49H0YIS7 233 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 TRIM77I1YAP6 450 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 SH2D1BO14796 132 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 RGS10O43665 173 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 FSTP19883 344 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 GABRR1P24046 479 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 BDKRB2P30411 391 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 UBA52P62987 128 aaKnown RBP10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 ACSM1Q08AH1 577 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 BAMBIQ13145 260 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 BLMHQ13867 455 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 SPHARQ15513 63 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 DDI2Q5TDH0 399 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 TMEM200BQ69YZ2 307 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 METAP1DQ6UB28 335 aaPredicted RBP10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 C1orf122Q6ZSJ8 110 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 GDPD3Q7L5L3 318 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 OR8H2Q8N162 312 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 PXT1Q8NFP0 134 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 OR5D13Q8NGL4 314 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 ZFAND2BQ8WV99 257 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 TNFAIP8L1Q8WVP5 186 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 DUX5Q96PT3 197 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 FAM192AQ9GZU8 254 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 CHST6Q9GZX3 395 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 METTL8Q9H825 291 aaKnown RBP10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 EXOSC4Q9NPD3 245 aaKnown RBP10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 GLS2Q9UI32 602 aa10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 RRP15Q9Y3B9 282 aaKnown RBP10.57□□□□□ -0.72
CNEP1R1-208ENST00000566482 COL6A5A8TX70 2615 aa10.56□□□□□ -0.72
CNEP1R1-208ENST00000566482 A0A1W2PPK0 400 aa10.56□□□□□ -0.72
CNEP1R1-208ENST00000566482 MAGEA13PA6NCF6 341 aa10.56□□□□□ -0.72
CNEP1R1-208ENST00000566482 SIRPB1O00241 398 aa10.56□□□□□ -0.72
CNEP1R1-208ENST00000566482 PSPNO60542 156 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms