RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 IFNEQ86WN2 208 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 GRAMD2AQ8IUY3 354 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 MSRB3Q8IXL7 192 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 RIMKLAQ8IXN7 391 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 MICU2Q8IYU8 434 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 FAM9CQ8IZT9 166 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 OR8H3Q8N146 312 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 OR2L13Q8N349 312 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 TMCO5AQ8N6Q1 288 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 LRRC17Q8N6Y2 441 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 CYB561D1Q8N8Q1 229 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 COX18Q8N8Q8 333 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 FADS6Q8N9I5 356 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 LINC00304Q8N9R0 145 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 WDR31Q8NA23 367 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 MNS1Q8NEH6 495 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 OR7G1Q8NGA0 311 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 OR4K17Q8NGC6 315 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 OR4D11Q8NGI4 311 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 OR4A15Q8NGL6 344 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 OR8K3Q8NH51 312 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 AENQ8WTP8 325 aaKnown RBP0.87□□□□□ -2.27
SMG1-212ENST00000566328 TWIST2Q8WVJ9 160 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 C22orf15Q8WYQ4 148 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 SLC7A6Q92536 515 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 RNASE6Q93091 150 aaKnown RBP0.87□□□□□ -2.27
SMG1-212ENST00000566328 PPCDCQ96CD2 204 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 RBMXL1Q96E39 390 aaKnown RBP0.87□□□□□ -2.27
SMG1-212ENST00000566328 L3HYPDHQ96EM0 354 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 C14orf79Q96F83 325 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 TMEM80Q96HE8 168 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 TSPAN32Q96QS1 320 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 OR5B2Q96R09 309 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 OR2M2Q96R28 347 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 OR7D2Q96RA2 312 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 FOXC2Q99958 501 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 SLC39A3Q9BRY0 314 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 CENPKQ9BS16 269 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 SLC35A5Q9BS91 424 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 FAIM2Q9BWQ8 316 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 DPY30Q9C005 99 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 ACTR6Q9GZN1 396 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 ROGDIQ9GZN7 287 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 OR51I1Q9H343 314 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 RNF122Q9H9V4 155 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 LPAR2Q9HBW0 351 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 TMBIM4Q9HC24 238 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 YAE1D1Q9NRH1 226 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 UBQLN4Q9NRR5 601 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 ZCCHC3Q9NUD5 404 aaKnown RBP0.87□□□□□ -2.27
SMG1-212ENST00000566328 DDX18Q9NVP1 670 aaKnown RBP0.87□□□□□ -2.27
SMG1-212ENST00000566328 MS4A12Q9NXJ0 267 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 TAS2R9Q9NYW1 312 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 TAS2R7Q9NYW3 318 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 TAS2R1Q9NYW7 299 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 SLC25A37Q9NYZ2 338 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 CCDC167Q9P0B6 97 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 VAPAQ9P0L0 249 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 MYEF2Q9P2K5 600 aaKnown RBP0.87□□□□□ -2.27
SMG1-212ENST00000566328 PSMC3IPQ9P2W1 217 aaPredicted RBP0.87□□□□□ -2.27
SMG1-212ENST00000566328 MBD2Q9UBB5 411 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 CLCF1Q9UBD9 225 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 ZNF629Q9UEG4 869 aaPredicted RBP0.87□□□□□ -2.27
SMG1-212ENST00000566328 IL20RAQ9UHF4 553 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 ATP6V1HQ9UI12 483 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 ZNF229Q9UJW7 825 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 PSME2Q9UL46 239 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 FOXA2Q9Y261 457 aaPredicted RBP0.87□□□□□ -2.27
SMG1-212ENST00000566328 EIF3LQ9Y262 564 aaKnown RBP0.87□□□□□ -2.27
SMG1-212ENST00000566328 STK38LQ9Y2H1 464 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 POMT1Q9Y6A1 747 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 EPPK1P58107 5090 aaKnown RBP0.87□□□□□ -2.27
SMG1-212ENST00000566328 VWFP04275 2813 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 STAB1Q9NY15 2570 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 RYR2Q92736 4967 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 KMT2AQ03164 3969 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 RYR1P21817 5038 aa0.87□□□□□ -2.27
SMG1-212ENST00000566328 ATRQ13535 2644 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 TGP01266 2768 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 LYSTQ99698 3801 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 FRAS1Q86XX4 4008 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 IGKV1D-42A0A075B6H8 117 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 IGLV3-32A0A0A0MS00 114 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 IGKV1D-43A0A0B4J1Z2 117 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 A0A0G2JND7 137 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 RNF103-CHMP3A0A140T963 221 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CIB4A0PJX0 185 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 C5orf63A6NC05 138 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CFAP73A6NFT4 308 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CPSF4LA6NMK7 179 aaKnown RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 ZNF716A6NP11 495 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ATP6V1G2-DDX39BF2Z307 99 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 H7C1C5 153 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 M0QX08 132 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 KPNA4O00629 521 aaPredicted RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 RFXANKO14593 260 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 UBDO15205 165 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ACOX3O15254 700 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 FMO6PO60774 539 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SMPD2O60906 423 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms