RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 FAM234AQ9H0X4 552 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 HMG20AQ9NP66 347 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 ELP2Q6IA86 826 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 ASCL4Q6XD76 172 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 IL17RELQ6ZVW7 336 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 C1QL2Q7Z5L3 287 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 TNFAIP8L1Q8WVP5 186 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 OR14J1Q9UGF5 321 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 SF3B6Q9Y3B4 125 aaKnown RBP17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 AUP1Q9Y679 476 aa17.44■□□□□ 0.38
SHCBP1-205ENST00000566016 A0A1W2PPK0 400 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 MAGEA13PA6NCF6 341 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 FSHBP01225 129 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 TFF1P04155 84 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 SFTPBP07988 381 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 CHRM2P08172 466 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 UCHL1P09936 223 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 PTGFRP43088 359 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 MTNR1BP49286 362 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 INSL4Q14641 139 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 SATL1Q86VE3 508 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 FGFRL1Q8N441 504 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 LY6G5BQ8NDX9 201 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 TMEM185AQ8NFB2 350 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 Q8NFD4 153 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 POM121Q96HA1 1249 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 DCTN5Q9BTE1 182 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 NDUFB11Q9NX14 153 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 IL36GQ9NZH8 169 aa17.43■□□□□ 0.38
SHCBP1-205ENST00000566016 TRBV23-1A0A0A0MS06 115 aa17.42■□□□□ 0.38
SHCBP1-205ENST00000566016 MEGF11A6BM72 1044 aa17.42■□□□□ 0.38
SHCBP1-205ENST00000566016 ZNF737O75373 536 aa17.42■□□□□ 0.38
SHCBP1-205ENST00000566016 PRKACAP17612 351 aa17.42■□□□□ 0.38
SHCBP1-205ENST00000566016 SRP14P37108 136 aaKnown RBP17.42■□□□□ 0.38
SHCBP1-205ENST00000566016 CEBPDP49716 269 aaPredicted RBP17.42■□□□□ 0.38
SHCBP1-205ENST00000566016 ARMCX4Q5H9R4 360 aa17.42■□□□□ 0.38
SHCBP1-205ENST00000566016 NANPQ8TBE9 248 aa17.42■□□□□ 0.38
SHCBP1-205ENST00000566016 GLS2Q9UI32 602 aa17.42■□□□□ 0.38
SHCBP1-205ENST00000566016 K7N7A8 449 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 RGS9O75916 674 aaPredicted RBP17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 INMTO95050 263 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 HAND1O96004 215 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 OR3A4PP47883 348 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 GP2P55259 537 aaKnown RBP17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 FGF12P61328 243 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 RPS25P62851 125 aaKnown RBP17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 SCGB2A2Q13296 93 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 SSX1Q16384 188 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 TMEM91Q6ZNR0 172 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 CEACAM19Q7Z692 300 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 LYPD6Q86Y78 171 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 TMEM203Q969S6 136 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 UPRTQ96BW1 309 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 FAM192AQ9GZU8 254 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 TCF7L1Q9HCS4 588 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 IL36RNQ9UBH0 155 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 METRNQ9UJH8 293 aa17.41■□□□□ 0.38
SHCBP1-205ENST00000566016 ARL6IP5O75915 188 aa17.4■□□□□ 0.38
SHCBP1-205ENST00000566016 TK1P04183 234 aa17.4■□□□□ 0.38
SHCBP1-205ENST00000566016 NDUFB7P17568 137 aa17.4■□□□□ 0.38
SHCBP1-205ENST00000566016 COL10A1Q03692 680 aa17.4■□□□□ 0.38
SHCBP1-205ENST00000566016 HSD17B12Q53GQ0 312 aa17.4■□□□□ 0.38
SHCBP1-205ENST00000566016 FAM27D1Q5T7N8 215 aa17.4■□□□□ 0.38
SHCBP1-205ENST00000566016 KIR3DL3Q8N743 410 aa17.4■□□□□ 0.38
SHCBP1-205ENST00000566016 UQCC2Q9BRT2 126 aa17.4■□□□□ 0.38
SHCBP1-205ENST00000566016 CUBNO60494 3623 aa17.39■□□□□ 0.38
SHCBP1-205ENST00000566016 ZNF780AO75290 641 aaPredicted RBP17.39■□□□□ 0.37
SHCBP1-205ENST00000566016 TNFAIP8O95379 198 aa17.39■□□□□ 0.37
SHCBP1-205ENST00000566016 MAS1P04201 325 aa17.39■□□□□ 0.37
SHCBP1-205ENST00000566016 GALP22466 123 aa17.39■□□□□ 0.37
SHCBP1-205ENST00000566016 RSU1Q15404 277 aa17.39■□□□□ 0.37
SHCBP1-205ENST00000566016 NHLRC3Q5JS37 347 aa17.39■□□□□ 0.37
SHCBP1-205ENST00000566016 CD200R1LQ6Q8B3 271 aa17.39■□□□□ 0.37
SHCBP1-205ENST00000566016 OR8H2Q8N162 312 aa17.39■□□□□ 0.37
SHCBP1-205ENST00000566016 OR51T1Q8NGJ9 327 aa17.39■□□□□ 0.37
SHCBP1-205ENST00000566016 H1FXQ92522 213 aaKnown RBP17.39■□□□□ 0.37
SHCBP1-205ENST00000566016 CNTD2Q9H8S5 307 aa17.39■□□□□ 0.37
SHCBP1-205ENST00000566016 KPTNQ9Y664 436 aa17.39■□□□□ 0.37
SHCBP1-205ENST00000566016 CCRL2O00421 344 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 SH2D1BO14796 132 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 MMP9P14780 707 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 ADRA2CP18825 462 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 SRMP19623 302 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 LMO1P25800 156 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 CAPZA1P52907 286 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 FABP5Q01469 135 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 JAGN1Q8N5M9 183 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 ASCC1Q8N9N2 400 aaKnown RBP17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 CHST4Q8NCG5 386 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 OR5D13Q8NGL4 314 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 SNX22Q96L94 193 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 S100A13Q99584 98 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 METTL9Q9H1A3 318 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 PPIL3Q9H2H8 161 aaKnown RBP17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 EXOSC4Q9NPD3 245 aaKnown RBP17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 PCDHB16Q9NRJ7 776 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 GSTK1Q9Y2Q3 226 aa17.38■□□□□ 0.37
SHCBP1-205ENST00000566016 GPR176Q14439 515 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 IL13RA2Q14627 380 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 METTL11BQ5VVY1 283 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms