RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 SNX22Q96L94 193 aa12.72□□□□□ -0.37
CDH11-210ENST00000564770 MNTQ99583 582 aa12.72□□□□□ -0.37
CDH11-210ENST00000564770 TMEM133Q9H2Q1 129 aa12.72□□□□□ -0.37
CDH11-210ENST00000564770 RBFOX1Q9NWB1 397 aaKnown RBP12.72□□□□□ -0.37
CDH11-210ENST00000564770 hADV38S2A0JD32 116 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 FAM172BPA6NC97 362 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 ZAR1LA6NP61 321 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 SYT7O43581 403 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 DNAJC8O75937 253 aaPredicted RBP12.71□□□□□ -0.37
CDH11-210ENST00000564770 APOL3O95236 402 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 CALCBP10092 127 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 DUSP1P28562 367 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 OR3A1P47881 315 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 NPBWR2P48146 333 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 GRK1Q15835 563 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 SLX4IPQ5VYV7 408 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 C12orf73Q69YU5 71 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 C11orf87Q6NUJ2 197 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 CCDC121Q6ZUS5 278 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 UTP4Q969X6 686 aaKnown RBP12.71□□□□□ -0.37
CDH11-210ENST00000564770 NRBF2Q96F24 287 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 IL4I1Q96RQ9 567 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 CLEC7AQ9BXN2 247 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 SLC7A11Q9UPY5 501 aa12.71□□□□□ -0.37
CDH11-210ENST00000564770 SH2D7A6NKC9 451 aaPredicted RBP12.7□□□□□ -0.38
CDH11-210ENST00000564770 ALDOBP05062 364 aa12.7□□□□□ -0.38
CDH11-210ENST00000564770 KRT8P05787 483 aa12.7□□□□□ -0.38
CDH11-210ENST00000564770 PF4V1P10720 104 aa12.7□□□□□ -0.38
CDH11-210ENST00000564770 HOXB6P17509 224 aaKnown RBP12.7□□□□□ -0.38
CDH11-210ENST00000564770 BCL3P20749 454 aa12.7□□□□□ -0.38
CDH11-210ENST00000564770 GABRR1P24046 479 aa12.7□□□□□ -0.38
CDH11-210ENST00000564770 AZGP1P25311 298 aaKnown RBP12.7□□□□□ -0.38
CDH11-210ENST00000564770 GDNFP39905 211 aa12.7□□□□□ -0.38
CDH11-210ENST00000564770 SNU13P55769 128 aaKnown RBP12.7□□□□□ -0.38
CDH11-210ENST00000564770 PRAMEF5Q5TYX0 476 aa12.7□□□□□ -0.38
CDH11-210ENST00000564770 EGFL6Q8IUX8 553 aa12.7□□□□□ -0.38
CDH11-210ENST00000564770 PRSS35Q8N3Z0 413 aa12.7□□□□□ -0.38
CDH11-210ENST00000564770 YIPF7Q8N8F6 280 aa12.7□□□□□ -0.38
CDH11-210ENST00000564770 CCDC197Q8NCU1 140 aa12.7□□□□□ -0.38
CDH11-210ENST00000564770 RNF166Q96A37 237 aaPredicted RBP12.7□□□□□ -0.38
CDH11-210ENST00000564770 PRRG3Q9BZD7 231 aa12.7□□□□□ -0.38
CDH11-210ENST00000564770 POMPQ9Y244 141 aa12.7□□□□□ -0.38
CDH11-210ENST00000564770 IGKV1-9A0A0C4DH69 117 aa12.69□□□□□ -0.38
CDH11-210ENST00000564770 LOC107986453A0A1B0GWG9 222 aa12.69□□□□□ -0.38
CDH11-210ENST00000564770 A0A1W2PQL4 384 aaPredicted RBP12.69□□□□□ -0.38
CDH11-210ENST00000564770 ENTPD6O75354 484 aa12.69□□□□□ -0.38
CDH11-210ENST00000564770 GATBO75879 557 aaKnown RBP12.69□□□□□ -0.38
CDH11-210ENST00000564770 AMY1AP04745 511 aa12.69□□□□□ -0.38
CDH11-210ENST00000564770 AMY2AP04746 511 aa12.69□□□□□ -0.38
CDH11-210ENST00000564770 FUT6P51993 359 aa12.69□□□□□ -0.38
CDH11-210ENST00000564770 KRTAP10-11P60412 298 aa12.69□□□□□ -0.38
CDH11-210ENST00000564770 ACTR3P61158 418 aa12.69□□□□□ -0.38
CDH11-210ENST00000564770 GID4Q8IVV7 300 aa12.69□□□□□ -0.38
CDH11-210ENST00000564770 MYDGFQ969H8 173 aa12.69□□□□□ -0.38
CDH11-210ENST00000564770 BORCS8Q96FH0 119 aa12.69□□□□□ -0.38
CDH11-210ENST00000564770 KRT84Q9NSB2 600 aa12.69□□□□□ -0.38
CDH11-210ENST00000564770 TRBV2A0A0J9YWF9 115 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 SIRPB1O00241 398 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 FAM107AO95990 144 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 IGLV1-47P01700 117 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 HTR1DP28221 377 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 PEX2P28328 305 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 KIR3DL2P43630 455 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 POU3F4P49335 361 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 P2RX3P56373 397 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 ZNF146Q15072 292 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 ABCA11PQ4W5N1 156 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 UTF1Q5T230 341 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 TRAPPC6BQ86SZ2 158 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 ADAT3Q96EY9 351 aaPredicted RBP12.68□□□□□ -0.38
CDH11-210ENST00000564770 SLC25A33Q9BSK2 321 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 LIN7BQ9HAP6 207 aa12.68□□□□□ -0.38
CDH11-210ENST00000564770 SEBOXQ9HB31 216 aaPredicted RBP12.68□□□□□ -0.38
CDH11-210ENST00000564770 WI2-2373I1.2A0A1W2PRP0 233 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 MGST3O14880 152 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 PF4P02776 101 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 LPLP06858 475 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 PRKACAP17612 351 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 ISL1P61371 349 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 SLC35A2P78381 396 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 IL18R1Q13478 541 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 ZBTB49Q6ZSB9 765 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 C16orf82Q7Z2V1 217 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 RNF144BQ7Z419 303 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 Q8IYB0 196 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 RDH10Q8IZV5 341 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 FAM58AQ8N1B3 248 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 BCAS4Q8TDM0 211 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 ZNF286AQ9HBT8 521 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 INPP5EQ9NRR6 644 aa12.67□□□□□ -0.38
CDH11-210ENST00000564770 H2AFY2Q9P0M6 372 aaPredicted RBP12.67□□□□□ -0.38
CDH11-210ENST00000564770 UBE2J1Q9Y385 318 aaPredicted RBP12.67□□□□□ -0.38
CDH11-210ENST00000564770 TSSC4Q9Y5U2 329 aaPredicted RBP12.67□□□□□ -0.38
CDH11-210ENST00000564770 IGKV1-12A0A0C4DH73 117 aa12.66□□□□□ -0.38
CDH11-210ENST00000564770 TCRBV4S1A1TA0A5B7 111 aa12.66□□□□□ -0.38
CDH11-210ENST00000564770 METTL15A6NJ78 407 aa12.66□□□□□ -0.38
CDH11-210ENST00000564770 OR2H2O95918 312 aa12.66□□□□□ -0.38
CDH11-210ENST00000564770 IGKV1D-12P01611 117 aa12.66□□□□□ -0.38
CDH11-210ENST00000564770 CDK2P24941 298 aa12.66□□□□□ -0.38
CDH11-210ENST00000564770 ERP29P30040 261 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms