RNA–Protein interactions for RNA: ENST00000564091.6

CLN3-211, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-211ENST00000564091 MMP23AO75900 390 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 APOL3O95236 402 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 MPIG6BO95866 241 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 ALDOBP05062 364 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 KRT8P05787 483 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 CD24P25063 80 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 NPBWR2P48146 333 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 FUT6P51993 359 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 TCTEX1D4Q5JR98 221 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 SLX4IPQ5VYV7 408 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 BAIAP2L2Q6UXY1 529 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 CCDC121Q6ZUS5 278 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 CATSPERDQ86XM0 798 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 EMG1Q92979 244 aaKnown RBP13.51□□□□□ -0.25
CLN3-211ENST00000564091 PRRG3Q9BZD7 231 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 TMEM133Q9H2Q1 129 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 RBFOX1Q9NWB1 397 aaKnown RBP13.51□□□□□ -0.25
CLN3-211ENST00000564091 LINC00312Q9Y6C7 94 aa13.51□□□□□ -0.25
CLN3-211ENST00000564091 A0A1W2PQL4 384 aaPredicted RBP13.5□□□□□ -0.25
CLN3-211ENST00000564091 GATBO75879 557 aaKnown RBP13.5□□□□□ -0.25
CLN3-211ENST00000564091 DNAJC8O75937 253 aaPredicted RBP13.5□□□□□ -0.25
CLN3-211ENST00000564091 FAM107AO95990 144 aa13.5□□□□□ -0.25
CLN3-211ENST00000564091 PF4V1P10720 104 aa13.5□□□□□ -0.25
CLN3-211ENST00000564091 PEX2P28328 305 aa13.5□□□□□ -0.25
CLN3-211ENST00000564091 SNU13P55769 128 aaKnown RBP13.5□□□□□ -0.25
CLN3-211ENST00000564091 CENPVQ7Z7K6 275 aaPredicted RBP13.5□□□□□ -0.25
CLN3-211ENST00000564091 RDH10Q8IZV5 341 aa13.5□□□□□ -0.25
CLN3-211ENST00000564091 OR4P4Q8NGL7 312 aa13.5□□□□□ -0.25
CLN3-211ENST00000564091 UTP4Q969X6 686 aaKnown RBP13.5□□□□□ -0.25
CLN3-211ENST00000564091 BORCS8Q96FH0 119 aa13.5□□□□□ -0.25
CLN3-211ENST00000564091 CLEC7AQ9BXN2 247 aa13.5□□□□□ -0.25
CLN3-211ENST00000564091 CHST5Q9GZS9 411 aa13.5□□□□□ -0.25
CLN3-211ENST00000564091 POMPQ9Y244 141 aa13.5□□□□□ -0.25
CLN3-211ENST00000564091 ZAR1LA6NP61 321 aa13.49□□□□□ -0.25
CLN3-211ENST00000564091 GYG2O15488 501 aa13.49□□□□□ -0.25
CLN3-211ENST00000564091 SERPINA3P01011 423 aa13.49□□□□□ -0.25
CLN3-211ENST00000564091 BCL3P20749 454 aa13.49□□□□□ -0.25
CLN3-211ENST00000564091 HTR1DP28221 377 aa13.49□□□□□ -0.25
CLN3-211ENST00000564091 ZNF91Q05481 1191 aa13.49□□□□□ -0.25
CLN3-211ENST00000564091 C12orf73Q69YU5 71 aa13.49□□□□□ -0.25
CLN3-211ENST00000564091 TRAPPC6BQ86SZ2 158 aa13.49□□□□□ -0.25
CLN3-211ENST00000564091 PRSS35Q8N3Z0 413 aa13.49□□□□□ -0.25
CLN3-211ENST00000564091 ADI1Q9BV57 179 aa13.49□□□□□ -0.25
CLN3-211ENST00000564091 KRT84Q9NSB2 600 aa13.49□□□□□ -0.25
CLN3-211ENST00000564091 TCRBV4S1A1TA0A5B7 111 aa13.48□□□□□ -0.25
CLN3-211ENST00000564091 METTL15A6NJ78 407 aa13.48□□□□□ -0.25
CLN3-211ENST00000564091 SH2D7A6NKC9 451 aaPredicted RBP13.48□□□□□ -0.25
CLN3-211ENST00000564091 K7EIL1 84 aa13.48□□□□□ -0.25
CLN3-211ENST00000564091 AZGP1P25311 298 aaKnown RBP13.48□□□□□ -0.25
CLN3-211ENST00000564091 OR3A1P47881 315 aa13.48□□□□□ -0.25
CLN3-211ENST00000564091 POU3F4P49335 361 aa13.48□□□□□ -0.25
CLN3-211ENST00000564091 PRAMEF5Q5TYX0 476 aa13.48□□□□□ -0.25
CLN3-211ENST00000564091 ZBTB49Q6ZSB9 765 aa13.48□□□□□ -0.25
CLN3-211ENST00000564091 GID4Q8IVV7 300 aa13.48□□□□□ -0.25
CLN3-211ENST00000564091 ENTHD1Q8IYW4 607 aa13.48□□□□□ -0.25
CLN3-211ENST00000564091 FAM58AQ8N1B3 248 aa13.48□□□□□ -0.25
CLN3-211ENST00000564091 ABHD12Q8N2K0 398 aa13.48□□□□□ -0.25
CLN3-211ENST00000564091 OR10H4Q8NGA5 316 aa13.48□□□□□ -0.25
CLN3-211ENST00000564091 STMN2Q93045 179 aa13.48□□□□□ -0.25
CLN3-211ENST00000564091 DPM3Q9P2X0 92 aa13.48□□□□□ -0.25
CLN3-211ENST00000564091 IGKV1-9A0A0C4DH69 117 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 LOC107986453A0A1B0GWG9 222 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 FAM172BPA6NC97 362 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 H3BUI4 141 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 SIRPB1O00241 398 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 MGST3O14880 152 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 ENTPD6O75354 484 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 LPLP06858 475 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 PRKACAP17612 351 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 P2RX3P56373 397 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 IL18R1Q13478 541 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 DNAL1Q4LDG9 190 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 ABCA11PQ4W5N1 156 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 C10orf99Q6UWK7 81 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 BCAS4Q8TDM0 211 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 MYDGFQ969H8 173 aa13.47□□□□□ -0.25
CLN3-211ENST00000564091 ADAT3Q96EY9 351 aaPredicted RBP13.47□□□□□ -0.25
CLN3-211ENST00000564091 SEBOXQ9HB31 216 aaPredicted RBP13.47□□□□□ -0.25
CLN3-211ENST00000564091 WARS2Q9UGM6 360 aaKnown RBP13.47□□□□□ -0.25
CLN3-211ENST00000564091 TRBV2A0A0J9YWF9 115 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 G3V2T6 193 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 SULT1C4O75897 302 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 PF4P02776 101 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 OR2T7P0C7T2 308 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 CDK2P24941 298 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 HTR1FP30939 366 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 GDNFP39905 211 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 KIR3DL2P43630 455 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 RBP2P50120 134 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 ATP1B3P54709 279 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 ZNF146Q15072 292 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 KDM4DQ6B0I6 523 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 Q8IYB0 196 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 CAPSLQ8WWF8 208 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 LIN7BQ9HAP6 207 aa13.46□□□□□ -0.25
CLN3-211ENST00000564091 UBE2J1Q9Y385 318 aaPredicted RBP13.46□□□□□ -0.25
CLN3-211ENST00000564091 TSSC4Q9Y5U2 329 aaPredicted RBP13.46□□□□□ -0.25
CLN3-211ENST00000564091 CYB5AP00167 134 aa13.45□□□□□ -0.26
CLN3-211ENST00000564091 ERP29P30040 261 aaKnown RBP13.45□□□□□ -0.26
CLN3-211ENST00000564091 BRS3P32247 399 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms