RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 Q6ZS49 121 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 AAED1Q7RTV5 226 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 LFNGQ8NES3 379 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 AKR1E2Q96JD6 320 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 FOXB1Q99853 325 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 SMDT1Q9H4I9 107 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 ESRP2Q9H6T0 727 aaKnown RBP11.34□□□□□ -0.59
USB1-207ENST00000563149 CRLF2Q9HC73 371 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 FAM86C1Q9NVL1 165 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 ST3GAL6Q9Y274 331 aa11.34□□□□□ -0.59
USB1-207ENST00000563149 MRPS18CQ9Y3D5 142 aaKnown RBP11.34□□□□□ -0.59
USB1-207ENST00000563149 IGKV1-12A0A0C4DH73 117 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 CCDC163A0A0D9SF12 145 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 ZNF816-ZNF321PA0A0X1KG74 233 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 CDS2O95674 445 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 IGKV1D-12P01611 117 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 P04436 131 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 FUT3P21217 361 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 CAMLGP49069 296 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 FXYD4P59646 89 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 PSG4Q00888 419 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 GNMTQ14749 295 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 MIDNQ504T8 468 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 ABLIM2Q6H8Q1 611 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 FBXL14Q8N1E6 418 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 Q8NFD4 153 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 OR4D5Q8NGN0 318 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 SECTM1Q8WVN6 248 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 SLC39A7Q92504 469 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 MARS2Q96GW9 593 aaKnown RBP11.33□□□□□ -0.59
USB1-207ENST00000563149 ABHD14BQ96IU4 210 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 C12orf57Q99622 126 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 PBDC1Q9BVG4 233 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 SCRT1Q9BWW7 348 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 OR2H1Q9GZK4 316 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 C19orf12Q9NSK7 152 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 ATPIF1Q9UII2 106 aa11.33□□□□□ -0.59
USB1-207ENST00000563149 PTAFRP25105 342 aa11.33□□□□□ -0.6
USB1-207ENST00000563149 LMO1P25800 156 aa11.33□□□□□ -0.6
USB1-207ENST00000563149 RBM11P57052 281 aaKnown RBP11.33□□□□□ -0.6
USB1-207ENST00000563149 CTAG1AP78358 180 aa11.33□□□□□ -0.6
USB1-207ENST00000563149 PIGYQ3MUY2 71 aa11.33□□□□□ -0.6
USB1-207ENST00000563149 NRN1LQ496H8 165 aa11.33□□□□□ -0.6
USB1-207ENST00000563149 GGNQ86UU5 652 aa11.33□□□□□ -0.6
USB1-207ENST00000563149 AKR7LQ8NHP1 331 aa11.33□□□□□ -0.6
USB1-207ENST00000563149 SFT2D1Q8WV19 159 aa11.33□□□□□ -0.6
USB1-207ENST00000563149 SPSB4Q96A44 273 aa11.33□□□□□ -0.6
USB1-207ENST00000563149 IER2Q9BTL4 223 aa11.33□□□□□ -0.6
USB1-207ENST00000563149 WNT5BQ9H1J7 359 aa11.33□□□□□ -0.6
USB1-207ENST00000563149 WFDC1Q9HC57 220 aa11.33□□□□□ -0.6
USB1-207ENST00000563149 DUXBA0A1W2PPF3 345 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 C1orf196B1AJZ1 125 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 G3V3Y1 287 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 MASP2O00187 686 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 NTN3O00634 580 aaPredicted RBP11.32□□□□□ -0.6
USB1-207ENST00000563149 MT-ND4LP03901 98 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 FOLR3P41439 243 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 ID4P47928 161 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 PPT1P50897 306 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 DUSP3P51452 185 aaPredicted RBP11.32□□□□□ -0.6
USB1-207ENST00000563149 RND3P61587 244 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 RSPO4Q2I0M5 234 aaPredicted RBP11.32□□□□□ -0.6
USB1-207ENST00000563149 PHLDA2Q53GA4 152 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 PLCXD3Q63HM9 321 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 ZNF561Q8N587 486 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 OR8G5Q8NG78 346 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 OR2V1Q8NHB1 315 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 OR14L1PQ8NHC6 308 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 SPIN2AQ99865 258 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 SPIN2BQ9BPZ2 258 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 PRDM14Q9GZV8 571 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 RPS10P5Q9NQ39 176 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 PILRBQ9UKJ0 227 aa11.32□□□□□ -0.6
USB1-207ENST00000563149 RCL1Q9Y2P8 373 aaKnown RBP11.32□□□□□ -0.6
USB1-207ENST00000563149 C3orf85A0A1B0GTC6 90 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 PCP4L1A6NKN8 68 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 TRDCB7Z8K6 153 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 RPL36A-HNRNPH2H7BZ11 118 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 PHF1O43189 567 aaPredicted RBP11.31□□□□□ -0.6
USB1-207ENST00000563149 DIRAS3O95661 229 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 AADACP22760 399 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 HOXA6P31267 233 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 MEOX2P50222 304 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 CLDN15P56746 228 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 ZNF92Q03936 586 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 ZFP36L1Q07352 338 aaKnown RBP11.31□□□□□ -0.6
USB1-207ENST00000563149 ZNF616Q08AN1 781 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 PMS2CLQ68D20 193 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 WDR5BQ86VZ2 330 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 OR52M1Q8NGK5 317 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 OR5L1Q8NGL2 311 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 HPSE2Q8WWQ2 592 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 PIGCQ92535 297 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 HIST1H2BAQ96A08 127 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 BSCL2Q96G97 398 aaPredicted RBP11.31□□□□□ -0.6
USB1-207ENST00000563149 ADGRG7Q96K78 797 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 TAAR9Q96RI9 348 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 C1QTNF5Q9BXJ0 243 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 C11orf1Q9H5F2 150 aa11.31□□□□□ -0.6
USB1-207ENST00000563149 IFT22Q9H7X7 185 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms