RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 MTCH1Q9NZJ7 389 aa12.56□□□□□ -0.4
HERPUD1-205ENST00000562914 RYR3Q15413 4870 aa12.56□□□□□ -0.4
HERPUD1-205ENST00000562914 FAM230AA0A1W2PPH8 454 aa12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 TMEM82A0PJX8 343 aa12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 FUOMA2VDF0 154 aa12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 OOSP1A8MZH6 123 aa12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 HAND1O96004 215 aa12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 MRPL3P09001 348 aaKnown RBP12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 JUNBP17275 347 aaPredicted RBP12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 CDC42P60953 191 aa12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 CBX1P83916 185 aa12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 CCDC144NLQ6NUI1 221 aa12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 ABHD12Q8N2K0 398 aa12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 C10orf35Q96D05 121 aa12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 ASB9Q96DX5 294 aa12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 COPS3Q9UNS2 423 aa12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 ARL2BPQ9Y2Y0 163 aa12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 DSCAML1Q8TD84 2053 aa12.55□□□□□ -0.4
HERPUD1-205ENST00000562914 MEX3AA1L020 520 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 CCDC182A6NF36 153 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 PRR32B1ATL7 298 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 CYB5AP00167 134 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 SERPINA3P01011 423 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 GABRR1P24046 479 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 HOXD3P31249 432 aaPredicted RBP12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 MNDAP41218 407 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 GP2P55259 537 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 P2RX3P56373 397 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 CXCR4P61073 352 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 ZNF91Q05481 1191 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 SPIN3Q5JUX0 258 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 HEPN1Q6WQI6 88 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 TRAPPC6BQ86SZ2 158 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 MRPL41Q8IXM3 137 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 TRMT10AQ8TBZ6 339 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 EMG1Q92979 244 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 BORCS8Q96FH0 119 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 CADM1Q9BY67 442 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 CHST5Q9GZS9 411 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 ZFP57Q9NU63 452 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 TAS2R3Q9NYW6 316 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 TVP23BQ9NYZ1 205 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 HHLA2Q9UM44 414 aa12.54□□□□□ -0.4
HERPUD1-205ENST00000562914 TRGV10A0A0A0MS01 117 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 PSMB11A5LHX3 300 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 B2RBV5 119 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 F8VVB4 439 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 F8VWA3 439 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 RAMP3O60896 148 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 IGLV1-47P01700 117 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 CD34P28906 385 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 THBS3P49746 956 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 GYS2P54840 703 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 MS4A2Q01362 244 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 ZNF146Q15072 292 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 SLC25A26Q70HW3 274 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 SLAMF9Q96A28 289 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 APOL4Q9BPW4 351 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 PCDHB16Q9NRJ7 776 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 CLN6Q9NWW5 311 aa12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 H2AFY2Q9P0M6 372 aaPredicted RBP12.53□□□□□ -0.4
HERPUD1-205ENST00000562914 TRBV2A0A0J9YWF9 115 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 A6NIN4 97 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 AQP12BA6NM10 295 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 ZNF670-ZNF695F2Z2N8 137 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 PSPNO60542 156 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 IGHA1P01876 353 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 AMY1AP04745 511 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 AMY2AP04746 511 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 FAM106CPP0CH98 169 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 MYCNOSP40205 109 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 PRRX1P54821 245 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 UBE2V2Q15819 145 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 TMEM236Q5W0B7 351 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 MEPCEQ7L2J0 689 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 TMEM179BQ7Z7N9 219 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 AQP12AQ8IXF9 295 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 SLC35F2Q8IXU6 374 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 ADGRG5Q8IZF4 528 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 COMMD1Q8N668 190 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 TPRX1Q8N7U7 411 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 DNAAF1Q8NEP3 725 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 OR52N4Q8NGI2 321 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 CHPT1Q8WUD6 406 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 PP6455Q8WZ26 134 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 CORO2AQ92828 525 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 ZNF649Q9BS31 505 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 TTTY10Q9BZA0 68 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 CHST6Q9GZX3 395 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 MOB4Q9Y3A3 225 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 HSPE1-MOB4S4R3N1 261 aa12.52□□□□□ -0.41
HERPUD1-205ENST00000562914 IGKV1-27A0A075B6S5 117 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 BUB1B-PAK6H3BSN5 160 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 TOR1AO14656 332 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 SYT7O43581 403 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 ZFPL1O95159 310 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 KRT8P05787 483 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 CDK2P24941 298 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 CD24P25063 80 aa12.51□□□□□ -0.41
HERPUD1-205ENST00000562914 LMO1P25800 156 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms