RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 CYTL1Q9NRR1 136 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 MYO10Q9HD67 2058 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 ZNF831Q5JPB2 1677 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 A0A1W2PQM1 296 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 J3QLI3 93 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 PGCP20142 388 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 NTSP30990 170 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 FGF9P31371 208 aaPredicted RBP8.21□□□□□ -1.1
CDH1-205ENST00000562836 CHI3L1P36222 383 aaPredicted RBP8.21□□□□□ -1.1
CDH1-205ENST00000562836 MEF2CQ06413 473 aaPredicted RBP8.21□□□□□ -1.1
CDH1-205ENST00000562836 TMEM69Q5SWH9 247 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 UTF1Q5T230 341 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 C1QL3Q5VWW1 255 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 Q6ZWC4 215 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 TCEANCQ8N8B7 351 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 COX18Q8N8Q8 333 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 NDRG1Q92597 394 aaKnown RBP8.21□□□□□ -1.1
CDH1-205ENST00000562836 PCED1BQ96HM7 432 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 POMKQ9H5K3 350 aa8.21□□□□□ -1.1
CDH1-205ENST00000562836 SDR39U1Q9NRG7 319 aaPredicted RBP8.21□□□□□ -1.1
CDH1-205ENST00000562836 COL16A1Q07092 1604 aaPredicted RBP8.2□□□□□ -1.1
CDH1-205ENST00000562836 COL14A1Q05707 1796 aaKnown RBP8.2□□□□□ -1.1
CDH1-205ENST00000562836 A0A0G2JLM5 398 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 KIR2DS5A0A0G2JLQ3 304 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 A0A0G2JNG1 304 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 HNRNPDLO14979 420 aaKnown RBP8.2□□□□□ -1.1
CDH1-205ENST00000562836 ZNF354AO60765 605 aaPredicted RBP8.2□□□□□ -1.1
CDH1-205ENST00000562836 ZNF682O95780 498 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 CD8AP01732 235 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 GUCA1AP43080 201 aaPredicted RBP8.2□□□□□ -1.1
CDH1-205ENST00000562836 NPBWR2P48146 333 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 P2RX1P51575 399 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 VAMP7P51809 220 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 ARG2P78540 354 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 KIR2DS5Q14953 304 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 VWA2Q5GFL6 755 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 UFSP1Q6NVU6 142 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 SLC39A11Q8N1S5 342 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 PNKDQ8N490 385 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 KIR2DL5BQ8NHK3 375 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 PPP1R1CQ8WVI7 109 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 RAB40CQ96S21 281 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 DUSP23Q9BVJ7 150 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 SCRT1Q9BWW7 348 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 NPFFR1Q9GZQ6 430 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 PARP11Q9NR21 331 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 GREB1LQ9C091 1923 aaPredicted RBP8.2□□□□□ -1.1
CDH1-205ENST00000562836 IGHV2-26A0A0B4J1V2 119 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 NAP1L6A6NFF2 107 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 FABP5P3A8MUU1 101 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 KIAA1324LA8MWY0 1029 aaPredicted RBP8.2□□□□□ -1.1
CDH1-205ENST00000562836 H0YL77 283 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 K7ESF4 209 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 NDUFB6O95139 128 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 CER1O95813 267 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 FCARP24071 287 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 TAS2R31P59538 309 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 MIDNQ504T8 468 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 ZNF880Q6PDB4 577 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 RBPMS2Q6ZRY4 209 aaKnown RBP8.2□□□□□ -1.1
CDH1-205ENST00000562836 FA2HQ7L5A8 372 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 ZDHHC23Q8IYP9 409 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 ZNF101Q8IZC7 436 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 TMEM256Q8N2U0 113 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 ZNF548Q8NEK5 533 aaPredicted RBP8.2□□□□□ -1.1
CDH1-205ENST00000562836 C8orf46Q8TAG6 207 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 DUSP16Q9BY84 665 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 TAF9BQ9HBM6 251 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 FBXL17Q9UF56 701 aa8.2□□□□□ -1.1
CDH1-205ENST00000562836 MBD3L4A6NDZ8 208 aaPredicted RBP8.19□□□□□ -1.1
CDH1-205ENST00000562836 MBD3L3A6NE82 208 aaPredicted RBP8.19□□□□□ -1.1
CDH1-205ENST00000562836 MBD3L5A6NJ08 208 aaPredicted RBP8.19□□□□□ -1.1
CDH1-205ENST00000562836 NUPR1O60356 82 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 HGFP14210 728 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 PBX2P40425 430 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 OR1E2P47887 323 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 SLC25A1P53007 311 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 TIRAPP58753 221 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 UFM1P61960 85 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 RGNQ15493 299 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 COX20Q5RI15 118 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 HMGN2P46Q86SG4 172 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 OR2I1PQ8NGU4 316 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 STARD4Q96DR4 205 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 JMJD8Q96S16 334 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 REEP1Q9H902 201 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 ASIC5Q9NY37 505 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 LTBP4Q8N2S1 1624 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 A0A0G2JLL6 359 aaPredicted RBP8.19□□□□□ -1.1
CDH1-205ENST00000562836 TRDV1A0A1B0GX56 115 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 MPPED1O15442 326 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 GAPDHP04406 335 aaKnown RBP8.19□□□□□ -1.1
CDH1-205ENST00000562836 SPINK8P0C7L1 97 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 HIST1H1EP10412 219 aaKnown RBP8.19□□□□□ -1.1
CDH1-205ENST00000562836 IGFBP2P18065 325 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 KLK2P20151 261 aa8.19□□□□□ -1.1
CDH1-205ENST00000562836 CST5P28325 142 aaPredicted RBP8.19□□□□□ -1.1
CDH1-205ENST00000562836 SNU13P55769 128 aaKnown RBP8.19□□□□□ -1.1
CDH1-205ENST00000562836 MRPS34P82930 218 aaKnown RBP8.19□□□□□ -1.1
CDH1-205ENST00000562836 ATP5G2Q06055 141 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms