RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ALDH3B2P48448 385 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 GZMKP49863 264 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 CAV3P56539 151 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 CLDN12P56749 244 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 COL10A1Q03692 680 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 SMIM21Q3B7S5 101 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 PIGYQ3MUY2 71 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 C1orf100Q5SVJ3 147 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 CYB5R2Q6BCY4 276 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 Q6P435 159 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 GLIPR1L1Q6UWM5 242 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 C1orf229Q6ZS94 237 aaPredicted RBP8.11□□□□□ -1.11
CLK3-208ENST00000562626 SLC16A12Q6ZSM3 486 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 IL17RELQ6ZVW7 336 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 BIVMQ86UB2 503 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 MKXQ8IYA7 352 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 SAXO1Q8IYX7 474 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 ZSCAN4Q8NAM6 433 aaPredicted RBP8.11□□□□□ -1.11
CLK3-208ENST00000562626 TMEM104Q8NE00 496 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 Q8NFD4 153 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 OR8B3Q8NGG8 313 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 OR13F1Q8NGS4 319 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 C12orf43Q96C57 262 aaKnown RBP8.11□□□□□ -1.11
CLK3-208ENST00000562626 SDSLQ96GA7 329 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 OR8B2Q96RD0 313 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 SSBP3Q9BWW4 388 aaPredicted RBP8.11□□□□□ -1.11
CLK3-208ENST00000562626 TCF7L1Q9HCS4 588 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 EXOSC4Q9NPD3 245 aaKnown RBP8.11□□□□□ -1.11
CLK3-208ENST00000562626 ING4Q9UNL4 249 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 MRPS28Q9Y2Q9 187 aaKnown RBP8.11□□□□□ -1.11
CLK3-208ENST00000562626 MXRA5Q9NR99 2828 aa8.11□□□□□ -1.11
CLK3-208ENST00000562626 LOC100506127A0A0U1RQW1 187 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 MEX3AA1L020 520 aaKnown RBP8.1□□□□□ -1.11
CLK3-208ENST00000562626 B4DSR2 109 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 SIRPB1O00241 398 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 SIGLEC5O15389 551 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 MAGEB3O15480 346 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 PSPNO60542 156 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 HTR3BO95264 441 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 HAND1O96004 215 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 KNG1P01042 644 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 DLX1P56177 255 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 LSM3P62310 102 aaKnown RBP8.1□□□□□ -1.11
CLK3-208ENST00000562626 GNB2P62879 340 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 QRFPP83859 136 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 UNC119Q13432 240 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 P2RY14Q15391 338 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 SLC22A6Q4U2R8 563 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 HES5Q5TA89 166 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 ELP2Q6IA86 826 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 C17orf107Q6ZR85 190 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 NKAIN3Q8N8D7 197 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 OR4S1Q8NGB4 309 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 ST8SIA4Q92187 359 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 THRSPQ92748 146 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 TMEM186Q96B77 213 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 FUNDC2Q9BWH2 189 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 MRPS26Q9BYN8 205 aaKnown RBP8.1□□□□□ -1.11
CLK3-208ENST00000562626 SHARPINQ9H0F6 387 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 BANF2Q9H503 90 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 YAE1D1Q9NRH1 226 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 HIF1ANQ9NWT6 349 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 IL36GQ9NZH8 169 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 CLN8Q9UBY8 286 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 GSTK1Q9Y2Q3 226 aa8.1□□□□□ -1.11
CLK3-208ENST00000562626 POLR3KQ9Y2Y1 108 aaPredicted RBP8.1□□□□□ -1.11
CLK3-208ENST00000562626 HIVEP2P31629 2446 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 TRAV1-2A0A0B4J238 106 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 NKX6-3A6NJ46 265 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 INAFM1C9JVW0 142 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 SLC22A1O15245 554 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 ARL6IP5O75915 188 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 OR2H2O95918 312 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 SLC2A2P11168 524 aaPredicted RBP8.09□□□□□ -1.11
CLK3-208ENST00000562626 GALP22466 123 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 OR3A1P47881 315 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 MTNR1BP49286 362 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 DVL1P1P54792 670 aaPredicted RBP8.09□□□□□ -1.11
CLK3-208ENST00000562626 FGF12P61328 243 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 NCS1P62166 190 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 IL13RA1P78552 427 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 PRB3Q04118 309 aaPredicted RBP8.09□□□□□ -1.11
CLK3-208ENST00000562626 ZNF146Q15072 292 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 RSU1Q15404 277 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 ESCO2Q56NI9 601 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 AWAT2Q6E213 333 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 BTN2A1Q7KYR7 527 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 TCF23Q7RTU1 214 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 SLC36A1Q7Z2H8 476 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 CDH26Q8IXH8 852 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 Q8IYB0 196 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 TPRX1Q8N7U7 411 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 TMEM185AQ8NFB2 350 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 OR51T1Q8NGJ9 327 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 TBC1D15Q8TC07 691 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 FAM46BQ96A09 425 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 TMPRSS13Q9BYE2 586 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 CHST6Q9GZX3 395 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 DNTTIP1Q9H147 329 aa8.09□□□□□ -1.11
CLK3-208ENST00000562626 C19orf12Q9NSK7 152 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms