RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 PTPMT1Q8WUK0 201 aaPredicted RBP16.32■□□□□ 0.2
RAB40C-206ENST00000561781 TMEM37Q8WXS4 190 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 NUDT11Q96G61 164 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 FOXN4Q96NZ1 517 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 HIPK2Q9H2X6 1198 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 SH3BGRL2Q9UJC5 107 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 B9D1Q9UPM9 204 aa16.32■□□□□ 0.2
RAB40C-206ENST00000561781 MRPS2Q9Y399 296 aaKnown RBP16.32■□□□□ 0.2
RAB40C-206ENST00000561781 ATXN7O15265 892 aaPredicted RBP16.31■□□□□ 0.2
RAB40C-206ENST00000561781 SQSTM1Q13501 440 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 HNRNPA1L2Q32P51 320 aaKnown RBP16.31■□□□□ 0.2
RAB40C-206ENST00000561781 C10orf53Q8N6V4 93 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 OR13G1Q8NGZ3 307 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 GON4LQ3T8J9 2241 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 LOC102723971A0A1B0GUV8 181 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 BPNT1O95861 308 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 OR5G3P0C626 314 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 GRK6P43250 576 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 GNB2P62879 340 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 IL13RA2Q14627 380 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 FAM189A2Q15884 450 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 LYPD6Q86Y78 171 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 KMT5CQ86Y97 462 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 LRRC75AQ8NAA5 344 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 ABHD14AQ9BUJ0 271 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 SERGEFQ9UGK8 458 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 RHBDD3Q9Y3P4 386 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 MPDZO75970 2070 aa16.31■□□□□ 0.2
RAB40C-206ENST00000561781 ATP6V0CP27449 155 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 PTGER4P35408 488 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 CNN1P51911 297 aaKnown RBP16.3■□□□□ 0.2
RAB40C-206ENST00000561781 Q8NFD4 153 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 OR2AJ1Q8NGZ0 328 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 VAMP8Q9BV40 100 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 FUT9Q9Y231 359 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 HIF3AQ9Y2N7 669 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 LATO43561 262 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 KNG1P01042 644 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 CT62P0C5K7 136 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 TUBG1P23258 451 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 UBE2G2P60604 165 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 C1QL3Q5VWW1 255 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 OR4N2Q8NGD1 307 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 CLDN23Q96B33 292 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 OR5B12Q96R08 314 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 MMP17Q9ULZ9 603 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 ALPK2Q86TB3 2170 aa16.3■□□□□ 0.2
RAB40C-206ENST00000561781 IGKV1D-42A0A075B6H8 117 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 BMI1P35226 326 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 RUNX2Q13950 521 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 DEFB134Q4QY38 66 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 RLN3Q8WXF3 142 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 MRPL24Q96A35 216 aaKnown RBP16.29■□□□□ 0.2
RAB40C-206ENST00000561781 TSPAN32Q96QS1 320 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 GABRG3Q99928 467 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 ELL3Q9HB65 397 aaPredicted RBP16.29■□□□□ 0.2
RAB40C-206ENST00000561781 LMX1BO60663 402 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 IGKV1D-16P01601 117 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 HLA-DQA2P01906 255 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 PEBP1P30086 187 aaKnown RBP16.29■□□□□ 0.2
RAB40C-206ENST00000561781 UCP3P55916 312 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 QRFPP83859 136 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 RPL19P84098 196 aaKnown RBP16.29■□□□□ 0.2
RAB40C-206ENST00000561781 VN1R4Q7Z5H5 301 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 DNAJA3Q96EY1 480 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 COX14Q96I36 57 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 PLK3Q9H4B4 646 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 Q9N2K0 584 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 LYRM2Q9NU23 88 aaPredicted RBP16.29■□□□□ 0.2
RAB40C-206ENST00000561781 HHLA2Q9UM44 414 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 KIF26BQ2KJY2 2108 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 CACNA1HO95180 2353 aa16.29■□□□□ 0.2
RAB40C-206ENST00000561781 CLEC18AA5D8T8 446 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 MAP1LC3B2A6NCE7 125 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 YPEL1O60688 119 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 MRPS21P82921 87 aaKnown RBP16.28■□□□□ 0.2
RAB40C-206ENST00000561781 WDR25Q64LD2 544 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-206ENST00000561781 LRP11Q86VZ4 500 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 IL22RA1Q8N6P7 574 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 CLEC18CQ8NCF0 446 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 ZNF738Q8NE65 137 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 OR4C5Q8NGB2 326 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 OR51G1Q8NGK1 321 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 YPEL2Q96QA6 119 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 MAP1LC3BQ9GZQ8 125 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 TMEM106BQ9NUM4 274 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 A6NCN8 305 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 AMY2BP19961 511 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 RAB38P57729 211 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 C1orf185Q5T7R7 199 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 RTL6Q6ICC9 239 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 DPPA3Q6W0C5 159 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 H1FOOQ8IZA3 346 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-206ENST00000561781 STPG4Q8N801 248 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 ZNF552Q9H707 407 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-206ENST00000561781 HSPB7Q9UBY9 170 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 PAM16Q9Y3D7 125 aa16.28■□□□□ 0.2
RAB40C-206ENST00000561781 FGF17O60258 216 aa16.27■□□□□ 0.2
RAB40C-206ENST00000561781 SYNGR4O95473 234 aa16.27■□□□□ 0.2
RAB40C-206ENST00000561781 RENP00797 406 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms