RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 Q499Y3 187 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 YIF1BQ5BJH7 314 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 SATL1Q86VE3 508 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 ZNF561Q8N587 486 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 C11orf42Q8N5U0 333 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 SIGLECL1Q8N7X8 197 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 PNLDC1Q8NA58 520 aaKnown RBP11.42□□□□□ -0.58
TPM1-230ENST00000561266 OR10K1Q8NGX5 313 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 C1orf147Q96MC9 270 aaPredicted RBP11.42□□□□□ -0.58
TPM1-230ENST00000561266 DERL3Q96Q80 235 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 MND1Q9BWT6 205 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 PPIL3Q9H2H8 161 aaKnown RBP11.42□□□□□ -0.58
TPM1-230ENST00000561266 HMG20AQ9NP66 347 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 ONECUT1Q9UBC0 465 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 TPRKBQ9Y3C4 175 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 DENRO43583 198 aaKnown RBP11.41□□□□□ -0.58
TPM1-230ENST00000561266 RGS10O43665 173 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 GPX5O75715 221 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 HAND1O96004 215 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 CD1AP06126 327 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 LIPFP07098 398 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 TMEM225BP0DP42 221 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 CAPZA1P52907 286 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 TAS2R43P59537 309 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 ZNF273Q14593 569 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 ZNF146Q15072 292 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 MED22Q15528 200 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 C11orf91Q3C1V1 193 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 TMEM200BQ69YZ2 307 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 HCP5Q6MZN7 132 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 Q6P435 159 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 METAP1DQ6UB28 335 aaPredicted RBP11.41□□□□□ -0.58
TPM1-230ENST00000561266 UNQ9370/PRO34162Q6UXP9 181 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 TCF23Q7RTU1 214 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 VMO1Q7Z5L0 202 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 LYPD6Q86Y78 171 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 PHC2Q8IXK0 858 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 PNKDQ8N490 385 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 ZDHHC22Q8N966 263 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 OR4S1Q8NGB4 309 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 TNFRSF14Q92956 283 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 LHX4Q969G2 390 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 CYYR1Q96J86 154 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 ZNF184Q99676 751 aaPredicted RBP11.41□□□□□ -0.58
TPM1-230ENST00000561266 SIRT7Q9NRC8 400 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 GSTK1Q9Y2Q3 226 aa11.41□□□□□ -0.58
TPM1-230ENST00000561266 RNASEK-C17orf49H0YIS7 233 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 GPR37O15354 613 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 TCF21O43680 179 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 CDRT1O95170 752 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 ALDOBP05062 364 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 CD2P06729 351 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 CHRM2P08172 466 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 OCMP0CE72 109 aaPredicted RBP11.4□□□□□ -0.58
TPM1-230ENST00000561266 CCL3L1P16619 93 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 TGFBR2P37173 567 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 BDH1Q02338 343 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 RBM48Q5RL73 367 aaKnown RBP11.4□□□□□ -0.58
TPM1-230ENST00000561266 DDI2Q5TDH0 399 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 METTL11BQ5VVY1 283 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 ASCL4Q6XD76 172 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 PRSS48Q7RTY5 328 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 SAXO1Q8IYX7 474 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 FAM185AQ8N0U4 392 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 PIP4P2Q8N4L2 257 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 TPRX1Q8N7U7 411 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 ASCC1Q8N9N2 400 aaKnown RBP11.4□□□□□ -0.58
TPM1-230ENST00000561266 DUX5Q96PT3 197 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 TMED9Q9BVK6 235 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 CCDC90BQ9GZT6 254 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 CHST6Q9GZX3 395 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 NEK6Q9HC98 313 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 NOX4Q9NPH5 578 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 SF3B6Q9Y3B4 125 aaKnown RBP11.4□□□□□ -0.58
TPM1-230ENST00000561266 KPTNQ9Y664 436 aa11.4□□□□□ -0.58
TPM1-230ENST00000561266 A0A1W2PP11 408 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 A0A1W2PRD5 423 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 A0A1W2PRF3 423 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 A0A1W2PRM7 423 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 SIRPB1O00241 398 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 OR2H2O95918 312 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 FSTP19883 344 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 BDKRB2P30411 391 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 OR3A1P47881 315 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 DLX6P56179 175 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 HILS1P60008 231 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 RPS25P62851 125 aaKnown RBP11.39□□□□□ -0.59
TPM1-230ENST00000561266 DEFB112Q30KQ8 113 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 LIPKQ5VXJ0 399 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 TMEM91Q6ZNR0 172 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 C9orf139Q6ZV77 190 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 Q8IYB0 196 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 BPIFB2Q8N4F0 458 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 ZSCAN4Q8NAM6 433 aaPredicted RBP11.39□□□□□ -0.59
TPM1-230ENST00000561266 PXT1Q8NFP0 134 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 TNFAIP8L1Q8WVP5 186 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 SNX22Q96L94 193 aa11.39□□□□□ -0.59
TPM1-230ENST00000561266 MS4A7Q9GZW8 240 aaPredicted RBP11.39□□□□□ -0.59
TPM1-230ENST00000561266 SEBOXQ9HB31 216 aaPredicted RBP11.39□□□□□ -0.59
TPM1-230ENST00000561266 TMEM138Q9NPI0 162 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms