RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 HSPE1-MOB4S4R3N1 261 aa14.66□□□□□ -0.06
TPM1-226ENST00000560959 U3KQV3 271 aa14.66□□□□□ -0.06
TPM1-226ENST00000560959 FAM90A18PA6NE21 464 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 FAM90A16PA6NEW6 464 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 FAM90A20PA6NIJ5 464 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 FAM90A9PA6NNJ1 464 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 FAM90A12PA8MX19 464 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 FAM90A5PA8MXJ8 464 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 NUDT19A8MXV4 375 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 F8VVB4 439 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 F8VWA3 439 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 LY6LH3BQJ8 138 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 BUB1B-PAK6H3BSN5 160 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 MGST3O14880 152 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 SRSF10O75494 262 aaKnown RBP14.65□□□□□ -0.06
TPM1-226ENST00000560959 FAM90A15PP0C7V4 464 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 FAM90A13PP0C7W8 464 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 FAM90A14PP0C7W9 464 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 FAM90A24PP0C7X0 464 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 ESRRGP62508 458 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 GINS1Q14691 196 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 TPTE2P1Q5T6R2 138 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 EGFL6Q8IUX8 553 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 ZNF695Q8IW36 515 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 Q8IYB0 196 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 ELMOD2Q8IZ81 293 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 TPRX1Q8N7U7 411 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 KLHL30-AS1Q8NEE0 82 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 FEVQ99581 238 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 TAS2R3Q9NYW6 316 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 ACTR3BQ9P1U1 418 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 DNAH1Q9P2D7 4330 aa14.65□□□□□ -0.06
TPM1-226ENST00000560959 A0A1B0GTI1 187 aa14.64□□□□□ -0.07
TPM1-226ENST00000560959 CCL24O00175 119 aa14.64□□□□□ -0.07
TPM1-226ENST00000560959 PSPNO60542 156 aa14.64□□□□□ -0.07
TPM1-226ENST00000560959 HAND1O96004 215 aa14.64□□□□□ -0.07
TPM1-226ENST00000560959 GABRR1P24046 479 aa14.64□□□□□ -0.07
TPM1-226ENST00000560959 RPS7P62081 194 aaKnown RBP14.64□□□□□ -0.07
TPM1-226ENST00000560959 SLC35B1P78383 322 aa14.64□□□□□ -0.07
TPM1-226ENST00000560959 CDK5Q00535 292 aa14.64□□□□□ -0.07
TPM1-226ENST00000560959 HLA-DRB5Q30154 266 aa14.64□□□□□ -0.07
TPM1-226ENST00000560959 C9orf66Q5T8R8 295 aa14.64□□□□□ -0.07
TPM1-226ENST00000560959 C18orf65Q6ZTR6 163 aa14.64□□□□□ -0.07
TPM1-226ENST00000560959 Q8NFD4 153 aa14.64□□□□□ -0.07
TPM1-226ENST00000560959 PCDHB16Q9NRJ7 776 aa14.64□□□□□ -0.07
TPM1-226ENST00000560959 LYSTQ99698 3801 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 IGHA1P01876 353 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 CDK2P24941 298 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 FUT6P51993 359 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 PRRX1P54821 245 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 P2RX3P56373 397 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 CDC42P60953 191 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 ACTR3P61158 418 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 CBX1P83916 185 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 ZNF91Q05481 1191 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 MFGE8Q08431 387 aaPredicted RBP14.63□□□□□ -0.07
TPM1-226ENST00000560959 ZNF146Q15072 292 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 TRAPPC6BQ86SZ2 158 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 BBS1Q8NFJ9 593 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 ASCL2Q99929 193 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 CADM1Q9BY67 442 aaKnown RBP14.63□□□□□ -0.07
TPM1-226ENST00000560959 CHST6Q9GZX3 395 aa14.63□□□□□ -0.07
TPM1-226ENST00000560959 ARGLU1Q9NWB6 273 aaPredicted RBP14.63□□□□□ -0.07
TPM1-226ENST00000560959 A0A087X0M5 115 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 TRGV10A0A0A0MS01 117 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 A0A1B0GX30 115 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 FAM230AA0A1W2PPH8 454 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 FUOMA2VDF0 154 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 PRR32B1ATL7 298 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 LOC110117498-PIK3R3F6TDL0 507 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 TOR1AO14656 332 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 FGF16O43320 207 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 SASH3O75995 380 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 CCL1P22362 96 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 BCL2L15Q5TBC7 163 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 CYP2R1Q6VVX0 501 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 OR5M8Q8NGP6 311 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 GIPC3Q8TF64 312 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 SLAMF9Q96A28 289 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 RAX2Q96IS3 184 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 PRR25Q96S07 402 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 OR52A1Q9UKL2 312 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 R4GMQ9 66 aa14.62□□□□□ -0.07
TPM1-226ENST00000560959 LCE6AA0A183 80 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 TCRBV5S2A0A599 114 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 A6NIN4 97 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 APOFQ13790 326 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 KIR2DS1Q14954 304 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 SPIN3Q5JUX0 258 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 PRAMEF5Q5TYX0 476 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 BAIAP2L2Q6UXY1 529 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 SLC25A26Q70HW3 274 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 C5orf56Q8N8D9 126 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 OR8U1Q8NH10 309 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 TRMT10AQ8TBZ6 339 aaKnown RBP14.61□□□□□ -0.07
TPM1-226ENST00000560959 EMG1Q92979 244 aaKnown RBP14.61□□□□□ -0.07
TPM1-226ENST00000560959 NOL4LQ96MY1 436 aaPredicted RBP14.61□□□□□ -0.07
TPM1-226ENST00000560959 TEX12Q9BXU0 123 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 NDE1Q9NXR1 346 aa14.61□□□□□ -0.07
TPM1-226ENST00000560959 SCOCQ9UIL1 159 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms