RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 SEBOXQ9HB31 216 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-219ENST00000560871 ELL3Q9HB65 397 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-219ENST00000560871 HMG20AQ9NP66 347 aa12.8□□□□□ -0.36
RABGGTA-219ENST00000560871 NOX4Q9NPH5 578 aa12.8□□□□□ -0.36
RABGGTA-219ENST00000560871 OR14J1Q9UGF5 321 aa12.8□□□□□ -0.36
RABGGTA-219ENST00000560871 FOXJ3Q9UPW0 622 aa12.8□□□□□ -0.36
RABGGTA-219ENST00000560871 ZNF737O75373 536 aa12.79□□□□□ -0.36
RABGGTA-219ENST00000560871 LIPFP07098 398 aa12.79□□□□□ -0.36
RABGGTA-219ENST00000560871 CPEP16870 476 aa12.79□□□□□ -0.36
RABGGTA-219ENST00000560871 MAPK3P27361 379 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-219ENST00000560871 GP2P55259 537 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-219ENST00000560871 EMX1Q04741 257 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-219ENST00000560871 LYPD6Q86Y78 171 aa12.79□□□□□ -0.36
RABGGTA-219ENST00000560871 PNLDC1Q8NA58 520 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-219ENST00000560871 TNFAIP8L1Q8WVP5 186 aa12.79□□□□□ -0.36
RABGGTA-219ENST00000560871 MGLLQ99685 303 aa12.79□□□□□ -0.36
RABGGTA-219ENST00000560871 TMED9Q9BVK6 235 aa12.79□□□□□ -0.36
RABGGTA-219ENST00000560871 RHOFQ9HBH0 211 aa12.79□□□□□ -0.36
RABGGTA-219ENST00000560871 CKLFQ9UBR5 152 aa12.79□□□□□ -0.36
RABGGTA-219ENST00000560871 SF3B6Q9Y3B4 125 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-219ENST00000560871 MAGEB3O15480 346 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 HAND1O96004 215 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 HSMCR30P0CW71 290 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 CALCBP10092 127 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 PRKACAP17612 351 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 ZNF93P35789 620 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 TGFBR2P37173 567 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 OR3A4PP47883 348 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 FGF12P61328 243 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 RPS25P62851 125 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 COL10A1Q03692 680 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 ACSM3Q53FZ2 586 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 SPIN3Q5JUX0 258 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 FAM27D1Q5T7N8 215 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 ASCL4Q6XD76 172 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 SPARTQ8N0X7 666 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 Q8NFD4 153 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 NANPQ8TBE9 248 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 DMRTB1Q96MA1 342 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 FAM234AQ9H0X4 552 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 SIRPDQ9H106 197 aa12.78□□□□□ -0.36
RABGGTA-219ENST00000560871 TRBV23-1A0A0A0MS06 115 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 A0A0A6YYJ9 748 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 TRAV40A0A0B4J280 105 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 K7N7A8 449 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 TK1P04183 234 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 CHRM2P08172 466 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 TMEM225BP0DP42 221 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 NDUFB7P17568 137 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 SSX1Q16384 188 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 ARMCX4Q5H9R4 360 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 UBE2UQ5VVX9 321 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 ELP2Q6IA86 826 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 FIP1L1Q6UN15 594 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 TMEM91Q6ZNR0 172 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 SATL1Q86VE3 508 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 SVOPQ8N4V2 548 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 KIR3DL3Q8N743 410 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 H1FXQ92522 213 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 TBX15Q96SF7 602 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 GPER1Q99527 375 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 FAM192AQ9GZU8 254 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 PPIL3Q9H2H8 161 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 OCEL1Q9H607 264 aa12.77□□□□□ -0.37
RABGGTA-219ENST00000560871 TMEM82A0PJX8 343 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 MAS1P04201 325 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 UCHL1P09936 223 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 IGHV4-38-2P0DP08 117 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 EPHA1P21709 976 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 PSMA1P25786 263 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 DUSP1P28562 367 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 PTGFRP43088 359 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 MTNR1BP49286 362 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 SNU13P55769 128 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 SCGB2A2Q13296 93 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 TRAM1Q15629 374 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 TUSC1Q2TAM9 212 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 KCTD21Q4G0X4 260 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 ZNF773Q6PK81 442 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 C17orf107Q6ZR85 190 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 NKAIN3Q8N8D7 197 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 ASCC1Q8N9N2 400 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 WDFY2Q96P53 400 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 CNTD2Q9H8S5 307 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 C19orf12Q9NSK7 152 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 IL36GQ9NZH8 169 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 GSTK1Q9Y2Q3 226 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 KPTNQ9Y664 436 aa12.76□□□□□ -0.37
RABGGTA-219ENST00000560871 PSPNO60542 156 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 VENTXO95231 258 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 OR2H2O95918 312 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 GABRA5P31644 462 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 BMXP51813 675 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 CAPZA1P52907 286 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 ARF6P62330 175 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 METTL11BQ5VVY1 283 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 Q6P435 159 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 LRRTM1Q86UE6 522 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 CDH26Q8IXH8 852 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 OR8H2Q8N162 312 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms