RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 PLEKHA8P1O95397 391 aa1.5□□□□□ -2.17
PSMA4-221ENST00000560842 CBR1P16152 277 aa1.5□□□□□ -2.17
PSMA4-221ENST00000560842 LGALS7P47929 136 aa1.5□□□□□ -2.17
PSMA4-221ENST00000560842 PSMD4P55036 377 aaKnown RBP1.5□□□□□ -2.17
PSMA4-221ENST00000560842 RPL31P62899 125 aaKnown RBP1.5□□□□□ -2.17
PSMA4-221ENST00000560842 ATP6V1FQ16864 119 aa1.5□□□□□ -2.17
PSMA4-221ENST00000560842 ATP6AP1LQ52LC2 224 aa1.5□□□□□ -2.17
PSMA4-221ENST00000560842 SYT6Q5T7P8 510 aaPredicted RBP1.5□□□□□ -2.17
PSMA4-221ENST00000560842 OR2K2Q8NGT1 345 aa1.5□□□□□ -2.17
PSMA4-221ENST00000560842 SHCBP1LQ9BZQ2 653 aa1.5□□□□□ -2.17
PSMA4-221ENST00000560842 RHOFQ9HBH0 211 aa1.5□□□□□ -2.17
PSMA4-221ENST00000560842 ZNF337Q9Y3M9 751 aa1.5□□□□□ -2.17
PSMA4-221ENST00000560842 MIA3Q5JRA6 1907 aa1.5□□□□□ -2.17
PSMA4-221ENST00000560842 ADAMTSL3P82987 1691 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 IGKV1D-37A0A075B6S9 117 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 A0A0B4J2C4 111 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 ANKRD20A5PA0PJZ0 165 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 F5H5P2 479 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 GYG2O15488 501 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 RALBP11234 206 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 SFTPCP11686 197 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 SRMP19623 302 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 CSRP1P21291 193 aaKnown RBP1.49□□□□□ -2.17
PSMA4-221ENST00000560842 CNTFRP26992 372 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 CCT6AP40227 531 aaKnown RBP1.49□□□□□ -2.17
PSMA4-221ENST00000560842 PCOTHQ58A44 107 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 ASCL4Q6XD76 172 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 CYHR1Q6ZMK1 362 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 LINC00596Q86U02 117 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 CCNYL1Q8N7R7 359 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 C12orf4Q9NQ89 552 aa1.49□□□□□ -2.17
PSMA4-221ENST00000560842 KMT2EQ8IZD2 1858 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 NCF1BA6NI72 391 aaPredicted RBP1.48□□□□□ -2.17
PSMA4-221ENST00000560842 NCF1CA8MVU1 366 aaPredicted RBP1.48□□□□□ -2.17
PSMA4-221ENST00000560842 H3BMM0 161 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 TCAPO15273 167 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 RGS5O15539 181 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 RNF113AO15541 343 aaKnown RBP1.48□□□□□ -2.17
PSMA4-221ENST00000560842 COX7A2P2O60397 106 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 ALOX12BO75342 701 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 DHRS3O75911 302 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 OPN1SWP03999 348 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 TAC1P20366 129 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 MSR1P21757 451 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 DEFB103AP81534 67 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 IDNKQ5T6J7 187 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 GLYATQ6IB77 296 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 LYZL2Q7Z4W2 148 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 NELFCDQ8IXH7 590 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 CA13Q8N1Q1 262 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 FBXO36Q8NEA4 188 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 OR5T3Q8NGG3 340 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 TOP1MTQ969P6 601 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 UBE2WQ96B02 151 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 YPEL4Q96NS1 127 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 QKIQ96PU8 341 aaKnown RBP eCLIP1.48□□□□□ -2.17
PSMA4-221ENST00000560842 RGCCQ9H4X1 137 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 TMEM106BQ9NUM4 274 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 AP3M1Q9Y2T2 418 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 NUP205Q92621 2012 aa1.48□□□□□ -2.17
PSMA4-221ENST00000560842 TTC41PQ6P2S7 1318 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 G3V3Q6 166 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 ZNF593O00488 134 aaPredicted RBP1.47□□□□□ -2.17
PSMA4-221ENST00000560842 UPK2O00526 184 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 FFAR1O14842 300 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 GZMAP12544 262 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 PEX19P40855 299 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 CCL23P55773 120 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 Q499Y3 187 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 DUPD1Q68J44 220 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 C16orf87Q6PH81 154 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 ZNF738Q8NE65 137 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 OR2M3Q8NG83 312 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 AGR3Q8TD06 166 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 OR2M4Q96R27 311 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 PRORYQ9H606 182 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 WDR55Q9H6Y2 383 aaPredicted RBP1.47□□□□□ -2.17
PSMA4-221ENST00000560842 PLEKHA1Q9HB21 404 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 PSME2Q9UL46 239 aa1.47□□□□□ -2.17
PSMA4-221ENST00000560842 ZNF706Q9Y5V0 76 aaPredicted RBP1.47□□□□□ -2.17
PSMA4-221ENST00000560842 AQRO60306 1485 aaKnown RBP eCLIP1.47□□□□□ -2.171e-7■■■■□ 26.1
PSMA4-221ENST00000560842 GOLGA6L7A0A1B0GV03 622 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 CD300LBA8K4G0 201 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 HMMRO75330 724 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 ETHE1O95571 254 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 SNAI1O95863 264 aaPredicted RBP1.46□□□□□ -2.18
PSMA4-221ENST00000560842 PDYNP01213 254 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 MLNP12872 115 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 CTLA4P16410 223 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 IFFO1Q0D2I5 559 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 TMEM241Q24JQ0 296 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 CEACAM16Q2WEN9 425 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 KRTAP21-3Q3LHN1 58 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 LINC00523Q86TU6 105 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 NDNFQ8TB73 568 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 CENPNQ96H22 339 aaPredicted RBP1.46□□□□□ -2.18
PSMA4-221ENST00000560842 GABARAPL1Q9H0R8 117 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 PORCNQ9H237 461 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 SLC38A1Q9H2H9 487 aa1.46□□□□□ -2.18
PSMA4-221ENST00000560842 CHRAC1Q9NRG0 131 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms