RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 PDCD1Q15116 288 aa11.72□□□□□ -0.53
CSPG4P11-201ENST00000560634 HFEQ30201 348 aa11.72□□□□□ -0.53
CSPG4P11-201ENST00000560634 UBALD1Q8TB05 177 aa11.72□□□□□ -0.53
CSPG4P11-201ENST00000560634 HSD17B10Q99714 261 aaKnown RBP11.72□□□□□ -0.53
CSPG4P11-201ENST00000560634 OR2D2Q9H210 308 aa11.72□□□□□ -0.53
CSPG4P11-201ENST00000560634 OR3A4PP47883 348 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 LSM6P62312 80 aaKnown RBP11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 COL19A1Q14993 1142 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 OR1L1Q8NH94 360 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 HMGCLL1Q8TB92 370 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 RPS4Y2Q8TD47 263 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 ZG16BQ96DA0 208 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 ZNF253O75346 499 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 ISXQ2M1V0 245 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 FAM74A3Q4VXF1 159 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 TMEM108Q6UXF1 575 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 PLPPR2Q96GM1 343 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 ST6GAL2Q96JF0 529 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 SIRT7Q9NRC8 400 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 MYO7AQ13402 2215 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 SHISA8B8ZZ34 492 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 SPINK4O60575 86 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 DEDDO75618 318 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 BCL3P20749 454 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 OR3A1P47881 315 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 UBE2L3P68036 154 aaKnown RBP11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 LRP11Q86VZ4 500 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 LRRC29Q8WV35 223 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 ATP5SQ99766 215 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 DCAF16Q9NXF7 216 aa11.71□□□□□ -0.53
CSPG4P11-201ENST00000560634 FAM74A7A6NL05 159 aa11.71□□□□□ -0.54
CSPG4P11-201ENST00000560634 MEOX1P50221 254 aa11.71□□□□□ -0.54
CSPG4P11-201ENST00000560634 POLR2GP62487 172 aaKnown RBP eCLIP11.71□□□□□ -0.54
CSPG4P11-201ENST00000560634 FZD5Q13467 585 aa11.71□□□□□ -0.54
CSPG4P11-201ENST00000560634 INSL4Q14641 139 aa11.71□□□□□ -0.54
CSPG4P11-201ENST00000560634 CXorf67Q86X51 503 aaPredicted RBP11.71□□□□□ -0.54
CSPG4P11-201ENST00000560634 EIF4E3Q8N5X7 224 aaKnown RBP11.71□□□□□ -0.54
CSPG4P11-201ENST00000560634 PECRQ9BY49 303 aa11.71□□□□□ -0.54
CSPG4P11-201ENST00000560634 WDR13Q9H1Z4 485 aa11.71□□□□□ -0.54
CSPG4P11-201ENST00000560634 CXXC4Q9H2H0 198 aa11.71□□□□□ -0.54
CSPG4P11-201ENST00000560634 KCNK15Q9H427 330 aa11.71□□□□□ -0.54
CSPG4P11-201ENST00000560634 SLC2A9Q9NRM0 540 aa11.71□□□□□ -0.54
CSPG4P11-201ENST00000560634 PRSS50Q9UI38 385 aa11.71□□□□□ -0.54
CSPG4P11-201ENST00000560634 MS4A18H0YCH9 400 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 GNG10P50151 68 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 RAC3P60763 192 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 HIST3H3Q16695 136 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 MS4A18Q3C1V0 323 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 DGAT2L7PQ6IED9 249 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 ANKRD37Q7Z713 158 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 BVESQ8NE79 360 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 OR52L2PQ8NGH6 319 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 OR10D3Q8NH80 312 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 GPBAR1Q8TDU6 330 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 IL22RA2Q969J5 263 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 TMPRSS13Q9BYE2 586 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 GPR27Q9NS67 375 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 HPXP02790 462 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 NAT1P18440 290 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 CAMPP49913 170 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 LINC01555Q8NAE3 123 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 OR1L3Q8NH93 324 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 GPR87Q9BY21 358 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 SLC52A3Q9NQ40 469 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 MRM2Q9UI43 246 aaKnown RBP11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 COL16A1Q07092 1604 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 PKD1L3Q7Z443 1732 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 IGHV1OR21-1A0A087WYE8 117 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 CDS2O95674 445 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 KLF3P57682 345 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 SLC25A30Q5SVS4 291 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 PDPNQ86YL7 162 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 NUBPLQ8TB37 319 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 RAB24Q969Q5 203 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 SF3B5Q9BWJ5 86 aaKnown RBP11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 CA10Q9NS85 328 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 VAX2Q9UIW0 290 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 TRDCB7Z8K6 153 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 ADAP1O75689 374 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 PRSS1P07477 247 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 ZNF83P51522 516 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 TNFAIP6P98066 277 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 FOXO1Q12778 655 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 SSPNQ14714 243 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 ALKBH6Q3KRA9 238 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 AWAT1Q58HT5 328 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 MRGPRX3Q96LB0 322 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 ANGPTL4Q9BY76 406 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 ARRDC1-AS1Q9H2J1 176 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 PRO1933Q9H354 126 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 ONECUT1Q9UBC0 465 aa11.7□□□□□ -0.54
CSPG4P11-201ENST00000560634 LOXHD1Q8IVV2 1947 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 TRAV34A0A0B4J273 112 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 DEFB108AA8MXU0 73 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 CDRT15L2A8MXV6 281 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 SKP2Q13309 424 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 CLEC18BQ6UXF7 455 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 TMEM116Q8NCL8 245 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 GLRX2Q9NS18 164 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 STARD10Q9Y365 291 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms