RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 H3BNX3 289 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 J3QRE1 110 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 SIRPB1O00241 398 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 SLC16A6O15403 523 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 PSPNO60542 156 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 CYB5AP00167 134 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 HTR1AP08908 422 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 OCM2P0CE71 109 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 OCMP0CE72 109 aaPredicted RBP8.26□□□□□ -1.09
LDLR-214ENST00000560628 PRKACBP22694 351 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 AZGP1P25311 298 aaKnown RBP8.26□□□□□ -1.09
LDLR-214ENST00000560628 PEX2P28328 305 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 SNRPGP62308 76 aaKnown RBP8.26□□□□□ -1.09
LDLR-214ENST00000560628 ZNF91Q05481 1191 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 MEF2CQ06413 473 aaPredicted RBP8.26□□□□□ -1.09
LDLR-214ENST00000560628 SCN1BQ07699 218 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 PDZK1IP1Q13113 114 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 HABP2Q14520 560 aaPredicted RBP8.26□□□□□ -1.09
LDLR-214ENST00000560628 C2orf68Q2NKX9 166 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 KCTD20Q7Z5Y7 419 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 LHFPL3Q86UP9 236 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 ENTHD1Q8IYW4 607 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 LYG1Q8N1E2 194 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 CBR4Q8N4T8 237 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 ACBD7Q8N6N7 88 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 KLHDC1Q8N7A1 406 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 DNAAF1Q8NEP3 725 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 OR11H6Q8NGC7 330 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 OR51A4Q8NGJ6 313 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 C10orf35Q96D05 121 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 MALSU1Q96EH3 234 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 HRASLS5Q96KN8 279 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 ZNF714Q96N38 554 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 SPACA5Q96QH8 159 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 NPFFR1Q9GZQ6 430 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 RAB18Q9NP72 206 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 ABCB10Q9NRK6 738 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 GSTK1Q9Y2Q3 226 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 HILPDAQ9Y5L2 63 aa8.26□□□□□ -1.09
LDLR-214ENST00000560628 IGKV1-12A0A0C4DH73 117 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 TRBV2A0A0J9YWF9 115 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 A6NDX4 124 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 VGLL3A8MV65 326 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 ODF3BA8MYP8 253 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 MMP23AO75900 390 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 IGKV1D-12P01611 117 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 ISG15P05161 165 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 ALDH3A2P51648 485 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 ACTA2P62736 377 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 ACTG2P63267 376 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 ACTC1P68032 377 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 ACTA1P68133 377 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 SLC25A30Q5SVS4 291 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 MEDAGQ5VYS4 303 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 ZNF626Q68DY1 528 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 FDX2Q6P4F2 183 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 BAIAP2L2Q6UXY1 529 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 LHFPL2Q6ZUX7 228 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 UTS2BQ765I0 119 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 TRAPPC6BQ86SZ2 158 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 Q8IYB0 196 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 ZNF676Q8N7Q3 588 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 OR5D18Q8NGL1 313 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 OR13C3Q8NGS6 347 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 RPS4Y2Q8TD47 263 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 LGALS12Q96DT0 336 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 PELI1Q96FA3 418 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 C4orf36Q96KX1 117 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 OPALINQ96PE5 141 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 MBOAT4Q96T53 435 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 RANBP3Q9H6Z4 567 aaPredicted RBP8.25□□□□□ -1.09
LDLR-214ENST00000560628 ZNF702PQ9H963 129 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 SEBOXQ9HB31 216 aaPredicted RBP8.25□□□□□ -1.09
LDLR-214ENST00000560628 HMG20AQ9NP66 347 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 AMBNQ9NP70 447 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 ING3Q9NXR8 418 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 GLS2Q9UI32 602 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 HHLA2Q9UM44 414 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 TCF19Q9Y242 345 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 EXOGQ9Y2C4 368 aaKnown RBP8.25□□□□□ -1.09
LDLR-214ENST00000560628 TBL2Q9Y4P3 447 aaKnown RBP8.25□□□□□ -1.09
LDLR-214ENST00000560628 GMPPBQ9Y5P6 360 aa8.25□□□□□ -1.09
LDLR-214ENST00000560628 OR4C45A6NMZ5 311 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 E9PQ18 207 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 SH2D1BO14796 132 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 MGST3O14880 152 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 RBP4P02753 201 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 OR3A1P47881 315 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 CCR9P51686 369 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 SLC34A1Q06495 639 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 ALKBH1Q13686 389 aaKnown RBP8.24□□□□□ -1.09
LDLR-214ENST00000560628 ZNF146Q15072 292 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 C11orf88Q6PI97 169 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 LIAT1Q6ZQX7 453 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 Q6ZS46 218 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 OR13C9Q8NGT0 318 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 NDNFQ8TB73 568 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 CFHR4Q92496 578 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 SPSB1Q96BD6 273 aa8.24□□□□□ -1.09
LDLR-214ENST00000560628 FOXRED1Q96CU9 486 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms