RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 C17orf100A8MU93 164 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 F5H5P2 479 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 IFNL4K9M1U5 179 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 SPRY1O43609 319 aaPredicted RBP9.93□□□□□ -0.82
LDLR-212ENST00000560467 TCF21O43680 179 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 LILRA1O75019 489 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 MPIG6BO95866 241 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 SERPINA2P20848 420 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 SRP14P37108 136 aaKnown RBP9.93□□□□□ -0.82
LDLR-212ENST00000560467 INPP1P49441 399 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 MRPS15P82914 257 aaKnown RBP9.93□□□□□ -0.82
LDLR-212ENST00000560467 IL18Q14116 193 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 PYDC2Q56P42 97 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 FAM76BQ5HYJ3 339 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 TMEM69Q5SWH9 247 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 CNIH2Q6PI25 160 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 SCCPDHQ8NBX0 429 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 HPSE2Q8WWQ2 592 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 DVL3Q92997 716 aaPredicted RBP9.93□□□□□ -0.82
LDLR-212ENST00000560467 SLC25A28Q96A46 364 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 OR2V2Q96R30 315 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 SELENOIQ9C0D9 397 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 RAB1BQ9H0U4 201 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 MYOZ1Q9NP98 299 aaPredicted RBP9.93□□□□□ -0.82
LDLR-212ENST00000560467 IL36GQ9NZH8 169 aa9.93□□□□□ -0.82
LDLR-212ENST00000560467 MYEF2Q9P2K5 600 aaKnown RBP9.93□□□□□ -0.82
LDLR-212ENST00000560467 TENM1Q9UKZ4 2725 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 A0A0B4J203 849 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 TMEM272A0A1B0GTI8 110 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 CDIPTO14735 213 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 ANGPTL7O43827 346 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 CDC14BO60729 498 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 NXPH2O95156 264 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 VSIG8P0DPA2 414 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 MGMTP16455 207 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 ELK1P19419 428 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 C16orf87Q6PH81 154 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 ASCL4Q6XD76 172 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 LAX1Q8IWV1 398 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 CMTM4Q8IZR5 234 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 C1orf87Q8N0U7 546 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 ZCCHC24Q8N2G6 241 aaKnown RBP9.92□□□□□ -0.82
LDLR-212ENST00000560467 OSR2Q8N2R0 312 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 CHST4Q8NCG5 386 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 SLAMF9Q96A28 289 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 NEDD4LQ96PU5 975 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 SAP30LQ9HAJ7 183 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 SPACA1Q9HBV2 294 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 C1orf123Q9NWV4 160 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 RASL12Q9NYN1 266 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 PPP1R3CQ9UQK1 317 aa9.92□□□□□ -0.82
LDLR-212ENST00000560467 IGKV1-27A0A075B6S5 117 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 A0A1B0GWJ7 208 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 ZSCAN5BA6NJL1 495 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 VGLL3A8MV65 326 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 H0YL77 283 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 MLNRO43193 412 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 AKR7A2O43488 359 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 XRCC3O43542 346 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 IGHV1-46P01743 117 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 ADH4P08319 380 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 ACAA1P09110 424 aaPredicted RBP9.91□□□□□ -0.82
LDLR-212ENST00000560467 DAOP14920 347 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 MPZP25189 248 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 ETV6P41212 452 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 PPOXP50336 477 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 ZP1P60852 638 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 MRPS10P82664 201 aaKnown RBP9.91□□□□□ -0.82
LDLR-212ENST00000560467 ZNF154Q13106 437 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 SMIM21Q3B7S5 101 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 PYHIN1Q6K0P9 492 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 C12orf54Q6X4T0 127 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 Q6ZR03 302 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 PEG10Q86TG7 708 aaKnown RBP9.91□□□□□ -0.82
LDLR-212ENST00000560467 LINC00596Q86U02 117 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 LYPD6Q86Y78 171 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 CALHM1Q8IU99 346 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 FAM58AQ8N1B3 248 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 LINC01356Q8N9X3 169 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 OR5H6Q8NGV6 325 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 OR10Z1Q8NGY1 313 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 AQP3Q92482 292 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 EMG1Q92979 244 aaKnown RBP9.91□□□□□ -0.82
LDLR-212ENST00000560467 MEGF10Q96KG7 1140 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 GAL3ST1Q99999 423 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 PPP1R3EQ9H7J1 279 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 UFSP2Q9NUQ7 469 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 ST3GAL6Q9Y274 331 aa9.91□□□□□ -0.82
LDLR-212ENST00000560467 TMEM14DPA8MWL7 114 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 SH2D1BO14796 132 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 VENTXO95231 258 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 EIF4EP06730 217 aaKnown RBP9.9□□□□□ -0.82
LDLR-212ENST00000560467 CD55P08174 381 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 GIFP27352 417 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 CD40LGP29965 261 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 GATA4P43694 442 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 RPS27AP62979 156 aaKnown RBP9.9□□□□□ -0.82
LDLR-212ENST00000560467 CCL8P80075 99 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 ELP2Q6IA86 826 aa9.9□□□□□ -0.82
LDLR-212ENST00000560467 OR10K2Q6IF99 312 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms