RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 SP1P08047 785 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 SELENOPP49908 381 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 FOXO1Q12778 655 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 PRR27Q6MZM9 219 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 ACSM6Q6P461 480 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 RPUSD4Q96CM3 377 aaKnown RBP11.93□□□□□ -0.5
TRAF3-208ENST00000560371 ZNF275Q9NSD4 429 aaPredicted RBP11.93□□□□□ -0.5
TRAF3-208ENST00000560371 NPTNQ9Y639 398 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 TCRBV16S1A1N1A0A5B0 115 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 LIPT2A6NK58 231 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 PDCD6O75340 191 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 GP1BAP07359 652 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 Q3ZCU0 254 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 A0A1B0GUH1 482 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 DBX1A6NMT0 343 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 CST7O76096 145 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 OR2C1O95371 312 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 PDGFAP04085 211 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 C4orf17Q53FE4 359 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 FAM103A1Q9BTL3 118 aaKnown RBP11.93□□□□□ -0.5
TRAF3-208ENST00000560371 TMEM147Q9BVK8 224 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 DOCK4Q8N1I0 1966 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 CALCRP30988 508 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.92□□□□□ -0.5
TRAF3-208ENST00000560371 FAM219BQ5XKK7 198 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 ZNF787Q6DD87 383 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 MRGPRDQ8TDS7 321 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 TMEM208Q9BTX3 173 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 SLC17A5Q9NRA2 495 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 CYR61O00622 381 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 HIST1H1DP16402 221 aaKnown RBP11.92□□□□□ -0.5
TRAF3-208ENST00000560371 LGALS7P47929 136 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 C6orf201Q7Z4U5 140 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 NEIL1Q96FI4 390 aaPredicted RBP11.92□□□□□ -0.5
TRAF3-208ENST00000560371 TMPRSS13Q9BYE2 586 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 WDR81Q562E7 1941 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 PDGFBP01127 241 aaPredicted RBP11.92□□□□□ -0.5
TRAF3-208ENST00000560371 FGF2P09038 288 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 H3F3CQ6NXT2 135 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 C1QBP02746 253 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 PMP22Q01453 160 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 ZNF485Q8NCK3 441 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 MED30Q96HR3 178 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 NTN4Q9HB63 628 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 LIFP15018 202 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 NTF3P20783 257 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 SIRT5Q9NXA8 310 aa11.92□□□□□ -0.5
TRAF3-208ENST00000560371 A0A1W2PRD5 423 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 A0A1W2PRF3 423 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 A0A1W2PRM7 423 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 DCTN6O00399 190 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 LILRB4Q8NHJ6 448 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 OR2D2Q9H210 308 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 A0A1B0GTH9 108 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 PGA3P0DJD8 388 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 STARD6P59095 220 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 DGAT2L6Q6ZPD8 337 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 TMEFF2Q9UIK5 374 aaPredicted RBP11.91□□□□□ -0.5
TRAF3-208ENST00000560371 F2RL2O00254 374 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 CDC42EP2O14613 210 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 ANKRD34CP0C6C1 535 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 CD80P33681 288 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 MSRB3Q8IXL7 192 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 OR8B12Q8NGG6 310 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 HGDQ93099 445 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 YIPF6Q96EC8 236 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 ZMAT5Q9UDW3 170 aaKnown RBP11.91□□□□□ -0.5
TRAF3-208ENST00000560371 OR5AP2Q8NGF4 316 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 WDR13Q9H1Z4 485 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 KIR2DS2P43631 304 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 LIMK1P53667 647 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 C21orf58P58505 322 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 C1QL3Q5VWW1 255 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 ASCL5Q7RTU5 278 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 FAM122BQ7Z309 247 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 GLCCI1Q86VQ1 547 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 LSMEM1Q8N8F7 131 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 C1RLQ9NZP8 487 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 A0A1W2PPV9 198 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 ZNF205O95201 554 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 MRM1Q6IN84 353 aaKnown RBP11.91□□□□□ -0.5
TRAF3-208ENST00000560371 GMPPAQ96IJ6 420 aaPredicted RBP11.91□□□□□ -0.5
TRAF3-208ENST00000560371 TMED3Q9Y3Q3 217 aa11.91□□□□□ -0.5
TRAF3-208ENST00000560371 ZNF90Q03938 601 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 ETFDHQ16134 617 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 SLC25A30Q5SVS4 291 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 PTPMT1Q8WUK0 201 aaPredicted RBP11.9□□□□□ -0.5
TRAF3-208ENST00000560371 UCN2Q96RP3 112 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 LSM2Q9Y333 95 aaKnown RBP11.9□□□□□ -0.5
TRAF3-208ENST00000560371 USF3Q68DE3 2245 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 IGHV3-43A0A0B4J1X8 118 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 UMAD1C9J7I0 102 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 IGHV3-43DP0DP04 118 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 GALP22466 123 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 PXDC1Q5TGL8 231 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 DPH3Q96FX2 82 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 GSX2Q9BZM3 304 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 SLC35D1Q9NTN3 355 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 COL4A5P29400 1685 aa11.9□□□□□ -0.5
TRAF3-208ENST00000560371 PRSS12P56730 875 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms