RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 EMG1Q92979 244 aaKnown RBP5.45□□□□□ -1.54
SPG11-221ENST00000560299 Q96M66 194 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 C1orf147Q96MC9 270 aaPredicted RBP5.45□□□□□ -1.54
SPG11-221ENST00000560299 GAL3ST1Q99999 423 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 SOSTQ9BQB4 213 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 RAB1BQ9H0U4 201 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 LPAR5Q9H1C0 372 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 TLNRD1Q9H1K6 362 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 SAP30LQ9HAJ7 183 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 CBLN4Q9NTU7 201 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 UFSP2Q9NUQ7 469 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 PLEKHJ1Q9NW61 149 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 C1orf123Q9NWV4 160 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 TAS2R8Q9NYW2 309 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 MTCH1Q9NZJ7 389 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 DNAJB11Q9UBS4 358 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 PPP1R3CQ9UQK1 317 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 NPTNQ9Y639 398 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 V9GYH0 126 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 MAP1AP78559 2803 aaPredicted RBP5.45□□□□□ -1.54
SPG11-221ENST00000560299 IGKV1-12A0A0C4DH73 117 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 A1L4Q6 167 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 ISPDA4D126 451 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 CENPXA8MT69 81 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 GABARAPH6UMI1 98 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 J3QRK9 145 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 RAB27BO00194 218 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 GSTZ1O43708 216 aaPredicted RBP5.44□□□□□ -1.54
SPG11-221ENST00000560299 SYNGR1O43759 233 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 UPK1BO75841 260 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 RBBP9O75884 186 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 OR7C1O76099 320 aaPredicted RBP5.44□□□□□ -1.54
SPG11-221ENST00000560299 ECDO95905 644 aaPredicted RBP5.44□□□□□ -1.54
SPG11-221ENST00000560299 IGKV1D-12P01611 117 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 GLAP06280 429 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 FUT3P21217 361 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 GABRR1P24046 479 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 CBX5P45973 191 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 NPBWR2P48146 333 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 PTH2RP49190 550 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 PPOXP50336 477 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 GNG2P59768 71 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 ACTBP60709 375 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 ACTG1P63261 375 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 CCL8P80075 99 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 SSBP1Q04837 148 aaKnown RBP5.44□□□□□ -1.54
SPG11-221ENST00000560299 ARFRP1Q13795 201 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 RBM39Q14498 530 aaKnown RBP5.44□□□□□ -1.54
SPG11-221ENST00000560299 TAF9Q16594 264 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 SWI5Q1ZZU3 235 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 CDNFQ49AH0 187 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 TMEM255AQ5JRV8 349 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 PRAMEF6Q5VXH4 476 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 CRIP3Q6Q6R5 217 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 WDR82Q6UXN9 313 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 C20orf204Q6ZNR8 217 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 RNF144BQ7Z419 303 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 MOGAT3Q86VF5 341 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 IZUMO1Q8IYV9 350 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 LILRB1Q8NHL6 650 aaPredicted RBP5.44□□□□□ -1.54
SPG11-221ENST00000560299 Q8TCH9 128 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 LRRC29Q8WV35 223 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 NEU4Q8WWR8 484 aaPredicted RBP5.44□□□□□ -1.54
SPG11-221ENST00000560299 IGFBPL1Q8WX77 278 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 NEUROG1Q92886 237 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 VRK1Q99986 396 aaPredicted RBP5.44□□□□□ -1.54
SPG11-221ENST00000560299 NRIP2Q9BQI9 281 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 THAP7Q9BT49 309 aaPredicted RBP5.44□□□□□ -1.54
SPG11-221ENST00000560299 SRRQ9GZT4 340 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 FGF23Q9GZV9 251 aaPredicted RBP5.44□□□□□ -1.54
SPG11-221ENST00000560299 KCNK15Q9H427 330 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 SCPEP1Q9HB40 452 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 ABCB10Q9NRK6 738 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 RNF7Q9UBF6 113 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 HSF4Q9ULV5 492 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 PLEKHA6Q9Y2H5 1048 aa5.44□□□□□ -1.54
SPG11-221ENST00000560299 IGHV3-64DA0A0J9YX35 117 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 A0A1W2PP11 408 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 SRRM5B3KS81 715 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 MCRIP1C9JLW8 97 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 H7C1Q1 480 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 GEMIN2O14893 280 aaKnown RBP5.43□□□□□ -1.54
SPG11-221ENST00000560299 DEGS1O15121 323 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 SOCS1O15524 211 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 PDCD6O75340 191 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 CA11O75493 328 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 RHBDL1O75783 438 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 KNG1P01042 644 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 HLA-DQB1P01920 261 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 LPLP06858 475 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 MELTFP08582 738 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 CD3GP09693 182 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 ZNF44P15621 663 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 HIST1H1DP16402 221 aaKnown RBP5.43□□□□□ -1.54
SPG11-221ENST00000560299 GNB3P16520 340 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 FAUP35544 74 aaKnown RBP5.43□□□□□ -1.54
SPG11-221ENST00000560299 PMELP40967 661 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 ERVK11-1P61568 191 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 PLA2G7Q13093 441 aa5.43□□□□□ -1.54
SPG11-221ENST00000560299 IKZF1Q13422 519 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms