RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 BLMHQ13867 455 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 KISS1Q15726 138 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 SPIN3Q5JUX0 258 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 RNLSQ5VYX0 342 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 ASCL4Q6XD76 172 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 OR8H2Q8N162 312 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 BATF2Q8N1L9 274 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 GPR148Q8TDV2 347 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 GCDHQ92947 438 aaPredicted RBP10.8□□□□□ -0.68
SMAD3-213ENST00000560175 SMIM19Q96E16 107 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 DUX5Q96PT3 197 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 NEK6Q9HC98 313 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 RBFOX1Q9NWB1 397 aaKnown RBP10.8□□□□□ -0.68
SMAD3-213ENST00000560175 IL36RNQ9UBH0 155 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 OR14J1Q9UGF5 321 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 DHDHQ9UQ10 334 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 TRBV5-5A0A0J9YX44 114 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 A0A0U1RQK1 487 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 A0A1W2PPH5 198 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 A0A1W2PQ09 198 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 NPFFO15130 113 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 SPRY1O43609 319 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-213ENST00000560175 XPNPEP2O43895 674 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 PSPNO60542 156 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 HAND1O96004 215 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 CYB5AP00167 134 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 RBP4P02753 201 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 MYL12AP19105 171 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 CFPP27918 469 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 ERP29P30040 261 aaKnown RBP10.79□□□□□ -0.68
SMAD3-213ENST00000560175 CAPZA1P52907 286 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 DLX1P56177 255 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 RPL15P61313 204 aaKnown RBP10.79□□□□□ -0.68
SMAD3-213ENST00000560175 RPS11P62280 158 aaKnown RBP eCLIP10.79□□□□□ -0.68
SMAD3-213ENST00000560175 ACTG1P63261 375 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 MEF2CQ06413 473 aaPredicted RBP10.79□□□□□ -0.68
SMAD3-213ENST00000560175 FOXL1Q12952 345 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 MED21Q13503 144 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 AWAT1Q58HT5 328 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 ELP2Q6IA86 826 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 C12orf54Q6X4T0 127 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 PXT1Q8NFP0 134 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 OR52N4Q8NGI2 321 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 SSMEM1Q8WWF3 244 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 EMG1Q92979 244 aaKnown RBP10.79□□□□□ -0.68
SMAD3-213ENST00000560175 ZDHHC16Q969W1 377 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 PGLYRP3Q96LB9 341 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 SPACA5Q96QH8 159 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 VCXQ9H320 206 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 ZNF281Q9Y2X9 895 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 KIAA2026Q5HYC2 2103 aa10.79□□□□□ -0.68
SMAD3-213ENST00000560175 ANGPTL7O43827 346 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 IGFBP3P17936 291 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-213ENST00000560175 EEF1B2P24534 225 aaKnown RBP10.78□□□□□ -0.68
SMAD3-213ENST00000560175 C21orf33P30042 268 aaPredicted RBP10.78□□□□□ -0.68
SMAD3-213ENST00000560175 POU3F4P49335 361 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 KLRD1Q13241 179 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 ZNF273Q14593 569 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 MIDNQ504T8 468 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 Q6P435 159 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 TCF23Q7RTU1 214 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 FAM185AQ8N0U4 392 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 NANOGP1Q8N7R0 232 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 OR4M1Q8NGD0 313 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 OR51A2Q8NGJ7 313 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 GHSRQ92847 366 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 TMEM106AQ96A25 262 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 CHIAQ9BZP6 476 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 MEGF9Q9H1U4 602 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 CHCHD3Q9NX63 227 aaKnown RBP10.78□□□□□ -0.68
SMAD3-213ENST00000560175 ZNRD1Q9P1U0 126 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 SF3B6Q9Y3B4 125 aaKnown RBP10.78□□□□□ -0.68
SMAD3-213ENST00000560175 MMP24Q9Y5R2 645 aa10.78□□□□□ -0.68
SMAD3-213ENST00000560175 FAM90A8PA6NJQ4 464 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 CSN2P05814 226 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 CD2P06729 351 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 FBP1P09467 338 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 ZNF728P0DKX0 622 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 CCL3L1P16619 93 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 PRKACAP17612 351 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 RAB3AP20336 220 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 SAA4P35542 130 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 PRB3Q04118 309 aaPredicted RBP10.77□□□□□ -0.69
SMAD3-213ENST00000560175 DOC2BQ14184 412 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 YIF1BQ5BJH7 314 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 C6orf141Q5SZD1 244 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 FIP1L1Q6UN15 594 aaKnown RBP10.77□□□□□ -0.69
SMAD3-213ENST00000560175 PDZD9Q8IXQ8 264 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 ASCC1Q8N9N2 400 aaKnown RBP10.77□□□□□ -0.69
SMAD3-213ENST00000560175 OR51T1Q8NGJ9 327 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 TSEN15Q8WW01 171 aaKnown RBP10.77□□□□□ -0.69
SMAD3-213ENST00000560175 RFT1Q96AA3 541 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 HEXA-AS1Q9H8Q6 139 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 TRRAPQ9Y4A5 3859 aa10.77□□□□□ -0.69
SMAD3-213ENST00000560175 TRBV5-7A0A0A0MS05 114 aa10.76□□□□□ -0.69
SMAD3-213ENST00000560175 hCG_1809904A0A1W2PP81 198 aa10.76□□□□□ -0.69
SMAD3-213ENST00000560175 A0A1W2PPE2 198 aa10.76□□□□□ -0.69
SMAD3-213ENST00000560175 A0A1W2PR64 198 aa10.76□□□□□ -0.69
SMAD3-213ENST00000560175 A0A1W2PRV1 198 aa10.76□□□□□ -0.69
SMAD3-213ENST00000560175 FAM181BA6NEQ2 426 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms