RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 ANGPTL5Q86XS5 388 aa17.18■□□□□ 0.34
PSEN1-225ENST00000560005 BCL6BQ8N143 479 aaPredicted RBP17.18■□□□□ 0.34
PSEN1-225ENST00000560005 PAQR4Q8N4S7 273 aaPredicted RBP17.18■□□□□ 0.34
PSEN1-225ENST00000560005 SYNPRQ8TBG9 265 aa17.18■□□□□ 0.34
PSEN1-225ENST00000560005 HAVCR1Q96D42 359 aa17.18■□□□□ 0.34
PSEN1-225ENST00000560005 TIMD4Q96H15 378 aa17.18■□□□□ 0.34
PSEN1-225ENST00000560005 OR51B6Q9H340 312 aa17.18■□□□□ 0.34
PSEN1-225ENST00000560005 CNTD2Q9H8S5 307 aa17.18■□□□□ 0.34
PSEN1-225ENST00000560005 PCDHB16Q9NRJ7 776 aa17.18■□□□□ 0.34
PSEN1-225ENST00000560005 RHBDL2Q9NX52 303 aa17.18■□□□□ 0.34
PSEN1-225ENST00000560005 CGGBP1Q9UFW8 167 aaPredicted RBP17.18■□□□□ 0.34
PSEN1-225ENST00000560005 RAB22AQ9UL26 194 aa17.18■□□□□ 0.34
PSEN1-225ENST00000560005 MPC1Q9Y5U8 109 aa17.18■□□□□ 0.34
PSEN1-225ENST00000560005 A0A0B4J203 849 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 IGKV1-9A0A0C4DH69 117 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 CD300LBA8K4G0 201 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 RNASE1P07998 156 aaKnown RBP17.17■□□□□ 0.34
PSEN1-225ENST00000560005 RBP2P50120 134 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 HFEQ30201 348 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 ZNF101Q8IZC7 436 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 CMTM4Q8IZR5 234 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 OR56B2PQ8NGI1 322 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 PIGCQ92535 297 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 GTF3AQ92664 365 aaKnown RBP17.17■□□□□ 0.34
PSEN1-225ENST00000560005 RAB1CQ92928 201 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 BORCS8Q96FH0 119 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 ZNF48Q96MX3 618 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-225ENST00000560005 SRRQ9GZT4 340 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 PPP1R3EQ9H7J1 279 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 GPR173Q9NS66 373 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 DECR2Q9NUI1 292 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 NKIRAS2Q9NYR9 191 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 NUP50Q9UKX7 468 aa17.17■□□□□ 0.34
PSEN1-225ENST00000560005 IGLV3-9A0A075B6K5 115 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 MDKP21741 143 aaPredicted RBP17.16■□□□□ 0.34
PSEN1-225ENST00000560005 MNDAP41218 407 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 MTCP1P56278 107 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 DEFA1P59665 94 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 DEFA3P59666 94 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 ERVS71-1P61550 626 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 MRPS10P82664 201 aaKnown RBP17.16■□□□□ 0.34
PSEN1-225ENST00000560005 GPR176Q14439 515 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 ZNF718Q3SXZ3 478 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 AWAT2Q6E213 333 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 RAB12Q6IQ22 244 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 RFPL4BQ6ZWI9 263 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 MOB3CQ70IA8 216 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 DEFB108BQ8NET1 73 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 OR4M1Q8NGD0 313 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 OR1J1Q8NGS3 322 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 KCNG3Q8TAE7 436 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 SAP30LQ9HAJ7 183 aa17.16■□□□□ 0.34
PSEN1-225ENST00000560005 MRPS28Q9Y2Q9 187 aaKnown RBP17.16■□□□□ 0.34
PSEN1-225ENST00000560005 ZNF250P15622 560 aa17.15■□□□□ 0.34
PSEN1-225ENST00000560005 PTGFRP43088 359 aa17.15■□□□□ 0.34
PSEN1-225ENST00000560005 SCN1BQ07699 218 aa17.15■□□□□ 0.34
PSEN1-225ENST00000560005 KLF17Q5JT82 389 aaPredicted RBP17.15■□□□□ 0.34
PSEN1-225ENST00000560005 HACD4Q5VWC8 232 aa17.15■□□□□ 0.34
PSEN1-225ENST00000560005 PLCXD3Q63HM9 321 aa17.15■□□□□ 0.34
PSEN1-225ENST00000560005 ZDHHC23Q8IYP9 409 aa17.15■□□□□ 0.34
PSEN1-225ENST00000560005 OR8H2Q8N162 312 aa17.15■□□□□ 0.34
PSEN1-225ENST00000560005 OR5A2Q8NGI9 324 aa17.15■□□□□ 0.34
PSEN1-225ENST00000560005 OR4D6Q8NGJ1 314 aa17.15■□□□□ 0.34
PSEN1-225ENST00000560005 PAPOLGQ9BWT3 736 aaKnown RBP17.15■□□□□ 0.34
PSEN1-225ENST00000560005 SLC22A4Q9H015 551 aa17.15■□□□□ 0.34
PSEN1-225ENST00000560005 CST11Q9H112 138 aa17.15■□□□□ 0.34
PSEN1-225ENST00000560005 MRPL15Q9P015 296 aaKnown RBP17.15■□□□□ 0.34
PSEN1-225ENST00000560005 RHBDD3Q9Y3P4 386 aa17.15■□□□□ 0.34
PSEN1-225ENST00000560005 TMEM272A0A1B0GTI8 110 aa17.14■□□□□ 0.33
PSEN1-225ENST00000560005 CTDSPLO15194 276 aa17.14■□□□□ 0.33
PSEN1-225ENST00000560005 XRCC3O43542 346 aa17.14■□□□□ 0.33
PSEN1-225ENST00000560005 ZNF780AO75290 641 aaPredicted RBP17.14■□□□□ 0.33
PSEN1-225ENST00000560005 GCH1P30793 250 aa17.14■□□□□ 0.33
PSEN1-225ENST00000560005 HLXQ14774 488 aaPredicted RBP17.14■□□□□ 0.33
PSEN1-225ENST00000560005 ZNF79Q15937 498 aa17.14■□□□□ 0.33
PSEN1-225ENST00000560005 CEACAM21Q3KPI0 293 aa17.14■□□□□ 0.33
PSEN1-225ENST00000560005 HIST2H2BDQ6DRA6 164 aa17.14■□□□□ 0.33
PSEN1-225ENST00000560005 SLC25A40Q8TBP6 338 aa17.14■□□□□ 0.33
PSEN1-225ENST00000560005 CCL17Q92583 94 aa17.14■□□□□ 0.33
PSEN1-225ENST00000560005 CMBLQ96DG6 245 aa17.14■□□□□ 0.33
PSEN1-225ENST00000560005 SLC25A38Q96DW6 304 aa17.14■□□□□ 0.33
PSEN1-225ENST00000560005 MMP26Q9NRE1 261 aa17.14■□□□□ 0.33
PSEN1-225ENST00000560005 ABCB10Q9NRK6 738 aa17.14■□□□□ 0.33
PSEN1-225ENST00000560005 PPIAL4EA0A075B759 164 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 PPIAL4CA0A0B4J2A2 164 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 ZNF850A8MQ14 1090 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 PPIAL4DF5H284 164 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 LDLRAD4O15165 306 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 PPIAL4FP0DN26 164 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 SRSF4Q08170 494 aaKnown RBP17.13■□□□□ 0.33
PSEN1-225ENST00000560005 PRDX4Q13162 271 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 SLC9A3R2Q15599 337 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 RGS21Q2M5E4 152 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 TMEM69Q5SWH9 247 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 GLIPR1L1Q6UWM5 242 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 Q8N402 240 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 ZSCAN4Q8NAM6 433 aaPredicted RBP17.13■□□□□ 0.33
PSEN1-225ENST00000560005 SETD6Q8TBK2 473 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 ELMOD3Q96FG2 381 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 NUDT16L1Q9BRJ7 211 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms