RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 OR10AC1Q8NH08 325 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 SPSB1Q96BD6 273 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 Q96MT0 163 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 ALG8Q9BVK2 526 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 TCF7L1Q9HCS4 588 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 S100A14Q9HCY8 104 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 RBFOX1Q9NWB1 397 aaKnown RBP16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 FBLN5Q9UBX5 448 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 KIAA2026Q5HYC2 2103 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 IGHA1P01876 353 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 MT-ND2P03891 347 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 PEX2P28328 305 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 PDZK1IP1Q13113 114 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 ZBTB49Q6ZSB9 765 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 TCF23Q7RTU1 214 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 LHFPL4Q7Z7J7 247 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 LHFPL3Q86UP9 236 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 SYS1Q8N2H4 156 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 ZNF676Q8N7Q3 588 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 OR52N4Q8NGI2 321 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 OR51A4Q8NGJ6 313 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 OR13D1Q8NGV5 346 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 PIFOQ8TCI5 191 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 OPALINQ96PE5 141 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 MYRFQ9Y2G1 1151 aa16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 TBL2Q9Y4P3 447 aaKnown RBP16.59■□□□□ 0.25
CHRNA3-207ENST00000559941 LOC100130705A0A1B0GUX0 176 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 hADV38S2A0JD32 116 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 MEX3AA1L020 520 aaKnown RBP16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 ODF3BA8MYP8 253 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 IGHV1-8P0DP01 117 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 PRKACAP17612 351 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 KIR2DS4P43632 304 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 GRK1Q15835 563 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 ZNF626Q68DY1 528 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 PQLC1Q8N2U9 271 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 OR11H6Q8NGC7 330 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 OR13C3Q8NGS6 347 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 PPP1R35Q8TAP8 253 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 ZNF714Q96N38 554 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 ZNF649Q9BS31 505 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 HMG20AQ9NP66 347 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 RAB18Q9NP72 206 aa16.58■□□□□ 0.24
CHRNA3-207ENST00000559941 KCNAB3O43448 404 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 PSPNO60542 156 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 FADS2O95864 444 aaKnown RBP16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 OCM2P0CE71 109 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 OCMP0CE72 109 aaPredicted RBP16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 GABRR1P24046 479 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 DUSP1P28562 367 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 GABRA5P31644 462 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 RAB40BQ12829 278 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 EDDM3AQ14507 147 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 SPIN3Q5JUX0 258 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 LIAT1Q6ZQX7 453 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 OR13C9Q8NGT0 318 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 RFT1Q96AA3 541 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 CHST6Q9GZX3 395 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 MMP27Q9H306 513 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 ISG20L2Q9H9L3 353 aaKnown RBP16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 AMBNQ9NP70 447 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 INPP5EQ9NRR6 644 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 MRPS18AQ9NVS2 196 aaKnown RBP16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 FAM118AQ9NWS6 357 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 GLS2Q9UI32 602 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 LINC00312Q9Y6C7 94 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 NOTCH1P46531 2555 aa16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 TET2Q6N021 2002 aaPredicted RBP16.57■□□□□ 0.24
CHRNA3-207ENST00000559941 IGKV1-12A0A0C4DH73 117 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 VGLL3A8MV65 326 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 EBAG9O00559 213 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 MGST3O14880 152 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 IGKV1D-12P01611 117 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 ARG1P05089 322 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 RPSAP08865 295 aaKnown RBP16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 CALCBP10092 127 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 MRPL28Q13084 256 aaKnown RBP16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 RNF144BQ7Z419 303 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 DYNAPQ8N1N2 210 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 TPRX1Q8N7U7 411 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 OR4S1Q8NGB4 309 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 FOXRED1Q96CU9 486 aaPredicted RBP16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 MALSU1Q96EH3 234 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 ZCCHC4Q9H5U6 513 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 RANBP3Q9H6Z4 567 aaPredicted RBP16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 NEK6Q9HC98 313 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 ERVK13-1Q9NX77 482 aa16.56■□□□□ 0.24
CHRNA3-207ENST00000559941 KDM4BO94953 1096 aa16.55■□□□□ 0.24
CHRNA3-207ENST00000559941 ALX3O95076 343 aa16.55■□□□□ 0.24
CHRNA3-207ENST00000559941 ERP29P30040 261 aaKnown RBP16.55■□□□□ 0.24
CHRNA3-207ENST00000559941 OR3A1P47881 315 aa16.55■□□□□ 0.24
CHRNA3-207ENST00000559941 EFNB2P52799 333 aa16.55■□□□□ 0.24
CHRNA3-207ENST00000559941 SNU13P55769 128 aaKnown RBP16.55■□□□□ 0.24
CHRNA3-207ENST00000559941 SAXO1Q8IYX7 474 aa16.55■□□□□ 0.24
CHRNA3-207ENST00000559941 OR52I1Q8NGK6 324 aa16.55■□□□□ 0.24
CHRNA3-207ENST00000559941 OR4C13Q8NGP0 309 aa16.55■□□□□ 0.24
CHRNA3-207ENST00000559941 SPACA5Q96QH8 159 aa16.55■□□□□ 0.24
CHRNA3-207ENST00000559941 RHOFQ9HBH0 211 aa16.55■□□□□ 0.24
CHRNA3-207ENST00000559941 GSTK1Q9Y2Q3 226 aa16.55■□□□□ 0.24
CHRNA3-207ENST00000559941 SIGLEC9Q9Y336 463 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms