RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 OPN1MW2P0DN77 364 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 OPN1MW3P0DN78 364 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 VSIG10L2P0DP72 767 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 GABRR1P24046 479 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 AZGP1P25311 298 aaKnown RBP9.92□□□□□ -0.82
SPG11-219ENST00000559822 PAX6P26367 422 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 POLR2IP36954 125 aaKnown RBP9.92□□□□□ -0.82
SPG11-219ENST00000559822 KIR3DL2P43630 455 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 POU3F4P49335 361 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 ISL1P61371 349 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 ACTA2P62736 377 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 ACTG2P63267 376 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 ZNF91Q05481 1191 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 SSX2Q16385 188 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 TP53I3Q53FA7 332 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 PLA1AQ53H76 456 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 MEDAGQ5VYS4 303 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 FAM58AQ8N1B3 248 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 ZNF676Q8N7Q3 588 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 OR2G2Q8NGZ5 317 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 PIFOQ8TCI5 191 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 FOXJ3Q9UPW0 622 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 SESN1Q9Y6P5 492 aa9.92□□□□□ -0.82
SPG11-219ENST00000559822 DAPL1A0PJW8 107 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 TMEM82A0PJX8 343 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 F2RL2O00254 374 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 MGST3O14880 152 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 SLC16A6O15403 523 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 FBXO24O75426 580 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 ISG15P05161 165 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 HTR1AP08908 422 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 PRKACAP17612 351 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 ATF1P18846 271 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 ERP29P30040 261 aaKnown RBP9.91□□□□□ -0.82
SPG11-219ENST00000559822 ARHGDIBP52566 201 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 ZNF85Q03923 595 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 IL18R1Q13478 541 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 ZNF146Q15072 292 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 ARSJQ5FYB0 599 aaPredicted RBP9.91□□□□□ -0.82
SPG11-219ENST00000559822 SLC25A30Q5SVS4 291 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 OR52W1Q6IF63 320 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 FDX2Q6P4F2 183 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 TRAPPC6BQ86SZ2 158 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 Q8N2B8 174 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 NDNFQ8TB73 568 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 RNFT2Q96EX2 444 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 HRASLS5Q96KN8 279 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 OPALINQ96PE5 141 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 PRSS22Q9GZN4 317 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 RHOFQ9HBH0 211 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 HHLA2Q9UM44 414 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 DSCAML1Q8TD84 2053 aa9.91□□□□□ -0.82
SPG11-219ENST00000559822 TGP01266 2768 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 IGHV2-26A0A0B4J1V2 119 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 A6NDX4 124 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 SH2D1BO14796 132 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 IGHA1P01876 353 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 ALPLP05186 524 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 BCL3P20749 454 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 CCR9P51686 369 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 P2RX3P56373 397 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 SNRPGP62308 76 aaKnown RBP9.9□□□□□ -0.82
SPG11-219ENST00000559822 EMX1Q04741 257 aaPredicted RBP9.9□□□□□ -0.82
SPG11-219ENST00000559822 SLC34A1Q06495 639 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 C1QL4Q86Z23 238 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 RDH10Q8IZV5 341 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 DYNAPQ8N1N2 210 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 ACBD7Q8N6N7 88 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 C11orf44Q8N8P7 122 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 OR4S1Q8NGB4 309 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 FGGYQ96C11 551 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 ADAT3Q96EY9 351 aaPredicted RBP9.9□□□□□ -0.82
SPG11-219ENST00000559822 MBOAT4Q96T53 435 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 CLEC7AQ9BXN2 247 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 CHST6Q9GZX3 395 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 TMEM133Q9H2Q1 129 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 GAL3ST2Q9H3Q3 398 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 ZNF702PQ9H963 129 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 EXOSC4Q9NPD3 245 aaKnown RBP9.9□□□□□ -0.82
SPG11-219ENST00000559822 RBFOX1Q9NWB1 397 aaKnown RBP9.9□□□□□ -0.82
SPG11-219ENST00000559822 FRRS1LQ9P0K9 344 aa9.9□□□□□ -0.82
SPG11-219ENST00000559822 UBE2J1Q9Y385 318 aaPredicted RBP9.9□□□□□ -0.82
SPG11-219ENST00000559822 TRGV10A0A0A0MS01 117 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 IGKV1-9A0A0C4DH69 117 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 MEX3AA1L020 520 aaKnown RBP9.89□□□□□ -0.83
SPG11-219ENST00000559822 MEGF11A6BM72 1044 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 XPNPEP2O43895 674 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 ENTPD6O75354 484 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 NPBWR2P48146 333 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 RAB13P51153 203 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 MRPL28Q13084 256 aaKnown RBP9.89□□□□□ -0.83
SPG11-219ENST00000559822 PDZK1IP1Q13113 114 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 ZFP1Q6P2D0 407 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 TCF23Q7RTU1 214 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 RTN4RL2Q86UN3 420 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 TMEM219Q86XT9 240 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 TPRX1Q8N7U7 411 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 OR52N4Q8NGI2 321 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 OR13C3Q8NGS6 347 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 CAPSLQ8WWF8 208 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms